RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CPB2Q96IY4 423 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 FIZ1Q96SL8 496 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 SELENOOQ9BVL4 669 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 SMARCAL1Q9NZC9 954 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 DBR1Q9UK59 544 aaKnown RBP14.08□□□□□ -0.16
COL18A1-201ENST00000342220 AJAP1Q9UKB5 411 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-201ENST00000342220 SNX12Q9UMY4 172 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 PGK1P00558 417 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 NLRP11P59045 1033 aaKnown RBP14.08□□□□□ -0.16
COL18A1-201ENST00000342220 CRHR2Q13324 411 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 DRAP1Q14919 205 aaPredicted RBP14.08□□□□□ -0.16
COL18A1-201ENST00000342220 DHX38Q92620 1227 aaKnown RBP14.08□□□□□ -0.16
COL18A1-201ENST00000342220 TINF2Q9BSI4 451 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 PACSIN1Q9BY11 444 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 TSGA10Q9BZW7 698 aa14.08□□□□□ -0.16
COL18A1-201ENST00000342220 H3BRB1 525 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 CTSHP09668 335 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 GGCXP38435 758 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 ACVR2BQ13705 512 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 EPM2AIP1Q7L775 607 aaPredicted RBP14.07□□□□□ -0.16
COL18A1-201ENST00000342220 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
COL18A1-201ENST00000342220 PLCB1Q9NQ66 1216 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 A0A087WZ62 844 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 TACC1O75410 805 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 ITGBL1O95965 494 aaPredicted RBP14.07□□□□□ -0.16
COL18A1-201ENST00000342220 ADSSP30520 456 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 GCLCP48506 637 aaPredicted RBP14.07□□□□□ -0.16
COL18A1-201ENST00000342220 ZFYVE27Q5T4F4 411 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 FRMD5Q7Z6J6 570 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 SESTD1Q86VW0 696 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 GLYCTKQ8IVS8 523 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 TRIM58Q8NG06 486 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 PLCD4Q9BRC7 762 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 FDXACB1Q9BRP7 624 aaPredicted RBP14.07□□□□□ -0.16
COL18A1-201ENST00000342220 NXF1Q9UBU9 619 aaKnown RBP14.07□□□□□ -0.16
COL18A1-201ENST00000342220 AGO2Q9UKV8 859 aaKnown RBP14.07□□□□□ -0.16
COL18A1-201ENST00000342220 ZMYM2Q9UBW7 1377 aa14.07□□□□□ -0.16
COL18A1-201ENST00000342220 NCK2O43639 380 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 GH1P01241 217 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 LGALS2P05162 132 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 ELNP15502 786 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 PSMC4P43686 418 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 NFRKBQ6P4R8 1299 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 ZBTB8OSQ8IWT0 167 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 AFAP1L1Q8TED9 768 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 FGD4Q96M96 766 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 INTS2Q9H0H0 1204 aaKnown RBP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 FAM184BQ9ULE4 1060 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 SOCS7O14512 581 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 SMPD1P17405 629 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 HNRNPH3P31942 346 aaKnown RBP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 TNFSF9P41273 254 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 ZNF200P98182 395 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 LAMTOR4Q0VGL1 99 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 PPFIA1Q13136 1202 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 CAPSQ13938 189 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 COBLL1Q53SF7 1204 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 IQCEQ6IPM2 695 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 TAS1R2Q8TE23 839 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 MAML3Q96JK9 1138 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 LRRC1Q9BTT6 524 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 DMGDHQ9UI17 866 aaKnown RBP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 SALL4Q9UJQ4 1053 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 EIF3DO15371 548 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 FTCDO95954 541 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 PAX7P23759 505 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 STAT1P42224 750 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 SLC7A5Q01650 507 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 NFX1Q12986 1120 aaKnown RBP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 PRPF4BQ13523 1007 aaKnown RBP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 MAPK6Q16659 721 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 ZNF568Q3ZCX4 644 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 PDXDC1Q6P996 788 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 SENP7Q9BQF6 1050 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 SMARCAD1Q9H4L7 1026 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 RBAKQ9NYW8 714 aaPredicted RBP14.06□□□□□ -0.16
COL18A1-201ENST00000342220 ERAP1Q9NZ08 941 aa14.06□□□□□ -0.16
COL18A1-201ENST00000342220 A0A087X0T9 212 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 ZNF233A6NK53 670 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 AGPSO00116 658 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 FAM228BP0C875 321 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 SSR1P43307 286 aaKnown RBP14.05□□□□□ -0.16
COL18A1-201ENST00000342220 PTK2Q05397 1052 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 ORC1Q13415 861 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 PASD1Q8IV76 773 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 HTTP42858 3142 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 STAM2O75886 525 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 SNAI1O95863 264 aaPredicted RBP14.05□□□□□ -0.16
COL18A1-201ENST00000342220 PRKCBP05771 671 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 GNASQ5JWF2 1037 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 KLHDC7AQ5VTJ3 777 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 RASAL3Q86YV0 1011 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 ZFYVE28Q9HCC9 887 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 KCND2Q9NZV8 630 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 MCM3APO60318 1980 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 NOL4O94818 638 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 TGFB3P10600 412 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 PIK3CAP42336 1068 aa14.05□□□□□ -0.16
COL18A1-201ENST00000342220 ZNF131P52739 623 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms