RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GJC2Q5T442 439 aaPredicted RBP17.56■□□□□ 0.4
HPS1-202ENST00000338546 ARHGEF19Q8IW93 802 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 BRSK2Q8IWQ3 736 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 METTL13Q8N6R0 699 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 HELQQ8TDG4 1101 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 TAS1R2Q8TE23 839 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 SHC3Q92529 594 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 UBXN4Q92575 508 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 SEMA4DQ92854 862 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 ZBTB45Q96K62 511 aaPredicted RBP17.56■□□□□ 0.4
HPS1-202ENST00000338546 POP1Q99575 1024 aaKnown RBP17.56■□□□□ 0.4
HPS1-202ENST00000338546 CGRRF1Q99675 332 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 PTPRHQ9HD43 1115 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 GNEQ9Y223 722 aaKnown RBP17.56■□□□□ 0.4
HPS1-202ENST00000338546 DDX3XO00571 662 aaKnown RBP eCLIP17.55■□□□□ 0.42e-10■■■■■ 28.4
HPS1-202ENST00000338546 IGHA2P01877 340 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 H2AFZP0C0S5 128 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 TNNI1P19237 187 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 ACOT2P49753 483 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 PRPF4BQ13523 1007 aaKnown RBP17.55■□□□□ 0.4
HPS1-202ENST00000338546 ENOX2Q16206 610 aaKnown RBP17.55■□□□□ 0.4
HPS1-202ENST00000338546 MTHFD1LQ6UB35 978 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 MPZL3Q6UWV2 235 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 H2AFVQ71UI9 128 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 TRAPPC12Q8WVT3 735 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 DHX38Q92620 1227 aaKnown RBP17.55■□□□□ 0.4
HPS1-202ENST00000338546 RPGRIP1Q96KN7 1286 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 ANKFY1Q9P2R3 1169 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 PCDHGC5Q9Y5F6 944 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 CNTNAP2Q9UHC6 1331 aa17.55■□□□□ 0.4
HPS1-202ENST00000338546 ZSWIM8A7E2V4 1837 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 ABLIM1O14639 778 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 FAM189A1O60320 539 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 EDN1P05305 212 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 ZNF865P0CJ78 1059 aaPredicted RBP17.54■□□□□ 0.4
HPS1-202ENST00000338546 TNFAIP3P21580 790 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 MBTD1Q05BQ5 628 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 WDR44Q5JSH3 913 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 PPM1KQ8N3J5 372 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 ZNF516Q92618 1163 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 APBA2Q99767 749 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 AGPAT1Q99943 283 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 GJD2Q9UKL4 321 aa17.54■□□□□ 0.4
HPS1-202ENST00000338546 ZEB2O60315 1214 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 MOCS3O95396 460 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 ATP1A1P05023 1023 aaKnown RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 CLCN3P51790 818 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 PPFIA1Q13136 1202 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 KYAT1Q16773 422 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 ATF7IP2Q5U623 682 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 RSRC2Q7L4I2 434 aaKnown RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 ZNF410Q86VK4 478 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 WDR49Q8IV35 697 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 OLIG1Q8TAK6 271 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 UBE2Q2Q8WVN8 375 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 LMBR1Q8WVP7 490 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 GOLGA1Q92805 767 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 NLRP4Q96MN2 994 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 KREMEN1Q96MU8 473 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 MAP7D2Q96T17 732 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 PDE11AQ9HCR9 933 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 TOPORSQ9NS56 1045 aaPredicted RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 C1orf112Q9NSG2 853 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 CPSF3Q9UKF6 684 aaKnown RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 CAPN6Q9Y6Q1 641 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 INO80B-WBP1J3KQ70 363 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 ZNF286BP0CG31 522 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 GZMAP12544 262 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 TCP1P17987 556 aaKnown RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 CKAP4Q07065 602 aaKnown RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 GRIK4Q16099 956 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 GPIHBP1Q8IV16 184 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 LNX1Q8TBB1 728 aaPredicted RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 TSC1Q92574 1164 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 RABGGTAQ92696 567 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 INO80BQ9C086 356 aaPredicted RBP17.53■□□□□ 0.4
HPS1-202ENST00000338546 IFT122Q9HBG6 1241 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 SALL4Q9UJQ4 1053 aa17.53■□□□□ 0.4
HPS1-202ENST00000338546 NRCAMQ92823 1304 aa17.52■□□□□ 0.4
HPS1-202ENST00000338546 DOCK3Q8IZD9 2030 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 EVPLQ92817 2033 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 CA12O43570 354 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 LRRN2O75325 713 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 ALDH1A1P00352 501 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 F2P00734 622 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 TMEM253P0C7T8 217 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 PNMA6AP0CW24 399 aaPredicted RBP17.52■□□□□ 0.39
HPS1-202ENST00000338546 CPT1AP50416 773 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 CHMP4BP1P59074 171 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 BPIFB4P59827 614 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 IGBP1P78318 339 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 PCBP1Q15365 356 aaKnown RBP eCLIP17.52■□□□□ 0.39
HPS1-202ENST00000338546 SMC1BQ8NDV3 1235 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 U2AF1L4Q8WU68 220 aaKnown RBP17.52■□□□□ 0.39
HPS1-202ENST00000338546 SNX12Q9UMY4 172 aa17.52■□□□□ 0.39
HPS1-202ENST00000338546 CTAGE15A4D2H0 777 aa17.51■□□□□ 0.39
HPS1-202ENST00000338546 TNPO2O14787 897 aaKnown RBP17.51■□□□□ 0.39
HPS1-202ENST00000338546 DYNC1LI2O43237 492 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms