RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SHCBP1Q8NEM2 672 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 DDX50Q9BQ39 737 aaKnown RBP11.95□□□□□ -0.5
POLR1B-202ENST00000333990 PTPN22Q9Y2R2 807 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 PCDHB7Q9Y5E2 793 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 CYTH3O43739 400 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 NPTXRO95502 500 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 CPP00450 1065 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 INHBAP08476 426 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 MAPTP10636 758 aaKnown RBP11.95□□□□□ -0.5
POLR1B-202ENST00000333990 UCHL3P15374 230 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 NOP14P78316 857 aaKnown RBP11.95□□□□□ -0.5
POLR1B-202ENST00000333990 ACVR2BQ13705 512 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 RHOT1Q8IXI2 618 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 PDIK1LQ8N165 341 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 VPS52Q8N1B4 723 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 RUSC1Q9BVN2 902 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 COLEC11Q9BWP8 271 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 DDX56Q9NY93 547 aaKnown RBP11.95□□□□□ -0.5
POLR1B-202ENST00000333990 HPSEQ9Y251 543 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 PIK3CDO00329 1044 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 RTN2O75298 545 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 UPP2O95045 317 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 NPTX2P47972 431 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 MPZL3Q6UWV2 235 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 SLC5A5Q92911 643 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 MAF1Q9H063 256 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 PLEKHA4Q9H4M7 779 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 OLFML3Q9NRN5 406 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 AFG3L2Q9Y4W6 797 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 TRIM17Q9Y577 477 aa11.95□□□□□ -0.5
POLR1B-202ENST00000333990 PODXLO00592 558 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 GMNNO75496 209 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 CABYRO75952 493 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 PPARGP37231 505 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-202ENST00000333990 KRT17Q04695 432 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 PPP2R5CQ13362 524 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 SLMAPQ14BN4 828 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 IQCB1Q15051 598 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 CCDC6Q16204 474 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 CEP85LQ5SZL2 805 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 C4orf50Q6ZRC1 276 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 TLK2Q86UE8 772 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 VSIG10LQ86VR7 867 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 NLGN2Q8NFZ4 835 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 HSPH1Q92598 858 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 TMEM169Q96HH4 297 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 MED15Q96RN5 788 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 XPNPEP3Q9NQH7 507 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 FGRP09769 529 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 YY1P25490 414 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 EPHB4P54760 987 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 SNX1Q13596 522 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 RBBP8NLQ8NC74 664 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-202ENST00000333990 PFDN4Q9NQP4 134 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 CYP26A1O43174 497 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 ATP2C2O75185 946 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 ZFXP17010 805 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-202ENST00000333990 ACADSBP45954 432 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 SP3Q02447 781 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.52e-7■■■■■ 26.8
POLR1B-202ENST00000333990 SNX17Q15036 470 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 ZNF677Q86XU0 584 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 REPS2Q8NFH8 660 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.5
POLR1B-202ENST00000333990 TINF2Q9BSI4 451 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 UVRAGQ9P2Y5 699 aa11.94□□□□□ -0.5
POLR1B-202ENST00000333990 YDJCA8MPS7 323 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 SH3BP5O60239 455 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 INSRRP14616 1297 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 STX2P32856 288 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 OR1G1P47890 313 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 RARRES1P49788 294 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 PDE1BQ01064 536 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 GFPT1Q06210 699 aaPredicted RBP11.93□□□□□ -0.5
POLR1B-202ENST00000333990 GIT2Q14161 759 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 KLC2Q9H0B6 622 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 WNT8AQ9H1J5 351 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.93□□□□□ -0.5
POLR1B-202ENST00000333990 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 PALMO75781 387 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 CYP2C19P33261 490 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 CNTN2Q02246 1040 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 OTOP1Q7RTM1 612 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 TAB3Q8N5C8 712 aaPredicted RBP11.93□□□□□ -0.5
POLR1B-202ENST00000333990 CYP39A1Q9NYL5 469 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 H3BRJ5 948 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 FGGP02679 453 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 CXCR5P32302 372 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 GTF2H1P32780 548 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 SLC1A1P43005 524 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 ALDH7A1P49419 539 aaKnown RBP11.93□□□□□ -0.5
POLR1B-202ENST00000333990 SH3TC2Q8TF17 1288 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 HPDLQ96IR7 371 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 TRPV6Q9H1D0 765 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 EPB41L5Q9HCM4 733 aa11.93□□□□□ -0.5
POLR1B-202ENST00000333990 RRAGDQ9NQL2 400 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms