RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PCOLCE2Q9UKZ9 415 aa7.56□□□□□ -1.2
CSTF3-201ENST00000323959 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 SGSM2O43147 1006 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 TGM5O43548 720 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 ATP9AO75110 1047 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 STAM2O75886 525 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 IFIT2P09913 472 aaKnown RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 ZNF883P0CG24 379 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 DDIT3P35638 169 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 PXNP49023 591 aaPredicted RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 SLC11A1P49279 550 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 AK2P54819 239 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 FOXK1P85037 733 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 TMEM266Q2M3C6 531 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 PPM1LQ5SGD2 360 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 LIN9Q5TKA1 542 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 RNF168Q8IYW5 571 aaPredicted RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 RUFY2Q8WXA3 655 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 DBNDD2Q9BQY9 259 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 MAP3K20Q9NYL2 800 aaKnown RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 DKK3Q9UBP4 350 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 THADAQ6YHU6 1953 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 SPECC1L-ADORA2AF8WAN1 911 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 ARHGAP33O14559 1287 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 SKIP12755 728 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 KPNA1P52294 538 aaPredicted RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 CRYBB1P53674 252 aaPredicted RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 NTHL1P78549 312 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 SP2Q02086 613 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 C2orf27AQ580R0 203 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 UTP14CQ5TAP6 766 aaKnown RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 GIMAP6Q6P9H5 292 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 GTPBP2Q9BX10 602 aaKnown RBP7.55□□□□□ -1.2
CSTF3-201ENST00000323959 ZDHHC5Q9C0B5 715 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 PILRBQ9UKJ0 227 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 PCDHGB2Q9Y5G2 931 aa7.55□□□□□ -1.2
CSTF3-201ENST00000323959 EFEMP2O95967 443 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 CTHP32929 405 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 MCM2P49736 904 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 GRM2Q14416 872 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 PABPC1LQ4VXU2 614 aaKnown RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 VSIG10LQ86VR7 867 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 DAGLBQ8NCG7 672 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 GIMAP8Q8ND71 665 aaPredicted RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 ZNF248Q8NDW4 579 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 ENGASEQ8NFI3 743 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 ACDQ96AP0 544 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 CAMK1GQ96NX5 476 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 MRPS23Q9Y3D9 190 aaKnown RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 KIAA1549LQ6ZVL6 1849 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 DCLK1O15075 740 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 CHADO15335 359 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 ZSCAN20P17040 1043 aaPredicted RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 EIF2AK2P19525 551 aaKnown RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 CCND2P30279 289 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 GNPTABQ3T906 1256 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 FAM228AQ86W67 206 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 TM6SF1Q9BZW5 370 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 ARMT1Q9H993 441 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 COL20A1Q9P218 1284 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 ZNF532Q9HCE3 1301 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 A0A0U1RQF3 1178 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 SSBP05455 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 HSPA4P34932 840 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 BYSLQ13895 437 aaKnown RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 UVSSAQ2YD98 709 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 TBC1D25Q3MII6 688 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 AACSQ86V21 672 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 PDCD2LQ9BRP1 358 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 SMARCAD1Q9H4L7 1026 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 TOR4AQ9NXH8 423 aa7.54□□□□□ -1.2
CSTF3-201ENST00000323959 DBNLQ9UJU6 430 aaKnown RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 CIZ1Q9ULV3 898 aaPredicted RBP7.54□□□□□ -1.2
CSTF3-201ENST00000323959 HNF1BP35680 557 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 INHBCP55103 352 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 CCDC173Q0VFZ6 552 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 DCAF6Q58WW2 860 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 NOMO2Q5JPE7 1267 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 LYSMD4Q5XG99 296 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 VITQ6UXI7 678 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 SYT13Q7L8C5 426 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 MFSD6LQ8IWD5 586 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 LSG1Q9H089 658 aaKnown RBP7.53□□□□□ -1.2
CSTF3-201ENST00000323959 PCNX1Q96RV3 2341 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 NOTCH4Q99466 2003 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 CFIP05156 583 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 C8BP07358 591 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 OS9Q13438 667 aaPredicted RBP7.53□□□□□ -1.2
CSTF3-201ENST00000323959 PTPAQ15257 358 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 SLC9C2Q5TAH2 1124 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 GLB1LQ6UWU2 654 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 EXOC4Q96A65 974 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 HELLSQ9NRZ9 838 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 TBC1D13Q9NVG8 400 aa7.53□□□□□ -1.2
CSTF3-201ENST00000323959 ABCA2Q9BZC7 2435 aa7.52□□□□□ -1.2
CSTF3-201ENST00000323959 PCSK5Q92824 1860 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms