RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 PRMT6Q96LA8 375 aaPredicted RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 DSCC1Q9BVC3 393 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 RUSC1Q9BVN2 902 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 MIS12Q9H081 205 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.86□□□□□ -1.79
GEN1-201ENST00000317402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.86□□□□□ -1.79
GEN1-201ENST00000317402 CNTNAP5Q8WYK1 1306 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTEFA5A3E0 1075 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 GOLGA8KD6RF30 607 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTEIP0CG38 1075 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CYP3A7P24462 503 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 IFNAR2P48551 515 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 PAPOLAP51003 745 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 COPB1P53618 953 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 NOP14P78316 857 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 CAVIN4Q5BKX8 364 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 PRR5LQ6MZQ0 368 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 POTEGQ6S5H5 508 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 RRAGAQ7L523 313 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 RBM46Q8TBY0 533 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 SLC20A1Q8WUM9 679 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 MIEF2Q96C03 454 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SPOCK3Q9BQ16 436 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 IMPG2Q9BZV3 1241 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SPC25Q9HBM1 224 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 DDX19AQ9NUU7 478 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 MAD2L2Q9UI95 211 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 CARD8Q9Y2G2 431 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 L3MBTL1Q9Y468 752 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 SLC4A7Q9Y6M7 1214 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 BTAF1O14981 1849 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 PSME4Q14997 1843 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ARID2Q68CP9 1835 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 KCNJ18B7U540 433 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 N4BP3O15049 544 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 MYL5Q02045 173 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 BIRC3Q13489 604 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 KCNJ12Q14500 433 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 EFTUD2Q15029 972 aaKnown RBP eCLIP3.86□□□□□ -1.797e-8■■□□□ 11.8
GEN1-201ENST00000317402 ARHGAP44Q17R89 818 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ZNF804AQ7Z570 1209 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 TRIM50Q86XT4 487 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 NSUN4Q96CB9 384 aaKnown RBP3.86□□□□□ -1.79
GEN1-201ENST00000317402 CALML4Q96GE6 196 aa3.86□□□□□ -1.79
GEN1-201ENST00000317402 ZFHX2Q9C0A1 2572 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 C2CD3Q4AC94 2353 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 C4AP0C0L4 1744 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 C4BP0C0L5 1744 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 EML1O00423 815 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SLC26A4O43511 780 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 MFAP3LO75121 409 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 CTNNA2P26232 953 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 LONP1P36776 959 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 CTCFP49711 727 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 PRELPP51888 382 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SLC8A3P57103 927 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ETF1P62495 437 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 IFI35P80217 286 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 FBXO41Q8TF61 875 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 BHMTQ93088 406 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 GPR108Q9NPR9 543 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 R3HDM2Q9Y2K5 976 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 PTPN22Q9Y2R2 807 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 F8W8V4 182 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 MED24O75448 989 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SKIP12755 728 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 CHKAP35790 457 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ATP6V1E1P36543 226 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SARSP49591 514 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 TRPC3Q13507 836 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ANGPT1Q15389 498 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 GDAP1Q8TB36 358 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 HAUS8Q9BT25 410 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ZBED2Q9BTP6 218 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SUCLA2Q9P2R7 463 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 LIMA1Q9UHB6 759 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 TUBE1Q9UJT0 475 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ARHGEF9O43307 516 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ATP6V1G1O75348 118 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PCP11498 1178 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 KLRC1P26715 233 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 NOP2P46087 812 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 TUBA1BP68363 451 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 ICA1Q05084 483 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PUM3Q15397 648 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 PPP1R2P3Q6NXS1 205 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 TUBA1AQ71U36 451 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 CHCHD4Q8N4Q1 142 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 MB21D1Q8N884 522 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 C3orf20Q8ND61 904 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 KCNG4Q8TDN1 519 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 LZICQ8WZA0 190 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 PHF20Q9BVI0 1012 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 DCP1AQ9NPI6 582 aaPredicted RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 TTF2Q9UNY4 1162 aaKnown RBP3.85□□□□□ -1.79
GEN1-201ENST00000317402 COL18A1P39060 1754 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 SPATA31A6Q5VVP1 1343 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 A0A1W2PRG0 241 aa3.85□□□□□ -1.79
GEN1-201ENST00000317402 MCF2LO15068 1137 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms