RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 C1RP00736 705 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
CKS2-201ENST00000314355 PEX3P56589 373 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 DSG1Q02413 1049 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 MTMR3Q13615 1198 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 HSP90AA2PQ14568 343 aaPredicted RBP13.96□□□□□ -0.17
CKS2-201ENST00000314355 PTPN21Q16825 1174 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 ARL6IP4Q66PJ3 421 aaKnown RBP13.96□□□□□ -0.17
CKS2-201ENST00000314355 C15orf39Q6ZRI6 1047 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 BMP8AQ7Z5Y6 402 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 GPR149Q86SP6 731 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 UBALD2Q8IYN6 164 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 HDAC7Q8WUI4 952 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 CALML4Q96GE6 196 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.17
CKS2-201ENST00000314355 PLEKHA4Q9H4M7 779 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 POMKQ9H5K3 350 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 PDZD7Q9H5P4 517 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 TMEM134Q9H6X4 195 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 TOPORSQ9NS56 1045 aaPredicted RBP13.96□□□□□ -0.17
CKS2-201ENST00000314355 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
CKS2-201ENST00000314355 ATG2AQ2TAZ0 1938 aa13.96□□□□□ -0.18
CKS2-201ENST00000314355 VWA3AA6NCI4 1184 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 H0YCG3 227 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 PDCP20941 246 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 UBA7P41226 1012 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 ECM1Q16610 540 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 KIAA0319Q5VV43 1072 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 HFE2Q6ZVN8 426 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 CEP57Q86XR8 500 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 RIN2Q8WYP3 895 aaPredicted RBP13.95□□□□□ -0.18
CKS2-201ENST00000314355 BSNDQ8WZ55 320 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 RXFP1Q9HBX9 757 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 POLD4Q9HCU8 107 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 KCND2Q9NZV8 630 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 FNIP2Q9P278 1114 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 SORCS3Q9UPU3 1222 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 TNFSF13BQ9Y275 285 aa13.95□□□□□ -0.18
CKS2-201ENST00000314355 CCDC195A0A1B0GUA6 201 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 CASTOR2A6NHX0 329 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 TEX28O15482 410 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 B4GALT3O60512 393 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 LILRB3O75022 631 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 HIP1RO75146 1068 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 RECQL4O94761 1208 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 WEE2P0C1S8 567 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 CDC25AP30304 524 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 MATR3P43243 847 aaKnown RBP eCLIP13.94□□□□□ -0.18
CKS2-201ENST00000314355 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
CKS2-201ENST00000314355 RINT1Q6NUQ1 792 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 TAS1R1Q7RTX1 841 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 PALB2Q86YC2 1186 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 ZDHHC14Q8IZN3 488 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 AK8Q96MA6 479 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 UROC1Q96N76 676 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 ACAP3Q96P50 834 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 TTPALQ9BTX7 342 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 VN1R3Q9BXE9 311 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 MAN1C1Q9NR34 630 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 CHST7Q9NS84 486 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 SLC38A7Q9NVC3 462 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 LARSQ9P2J5 1176 aaKnown RBP13.94□□□□□ -0.18
CKS2-201ENST00000314355 LIMD1Q9UGP4 676 aa13.94□□□□□ -0.18
CKS2-201ENST00000314355 MUC3AQ02505 3323 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 ARID2Q68CP9 1835 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 C2CD4DB7Z1M9 353 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 SLC26A4O43511 780 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 NPTX2P47972 431 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 ZNF568Q3ZCX4 644 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 FAM171A1Q5VUB5 890 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 GLYCTKQ8IVS8 523 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 SYT2Q8N9I0 419 aaPredicted RBP13.93□□□□□ -0.18
CKS2-201ENST00000314355 KREMEN2Q8NCW0 462 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 GSTCDQ8NEC7 633 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 CMASQ8NFW8 434 aaPredicted RBP13.93□□□□□ -0.18
CKS2-201ENST00000314355 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
CKS2-201ENST00000314355 KIFC3Q9BVG8 833 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 GPR62Q9BZJ7 368 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 CCDC113Q9H0I3 377 aa13.93□□□□□ -0.18
CKS2-201ENST00000314355 PP2D1A8MPX8 630 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 B3GAT3O94766 335 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 KRT18P05783 430 aaKnown RBP13.92□□□□□ -0.18
CKS2-201ENST00000314355 GUCY2CP25092 1073 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 GBP2P32456 591 aaPredicted RBP13.92□□□□□ -0.18
CKS2-201ENST00000314355 LIN9Q5TKA1 542 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 C1orf186Q6ZWK4 172 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 FBXL6Q8N531 539 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 SMG7Q92540 1137 aaKnown RBP13.92□□□□□ -0.18
CKS2-201ENST00000314355 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 TBC1D32Q96NH3 1257 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 PLIN2Q99541 437 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 IRF2BPLQ9H1B7 796 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 ZDHHC7Q9NXF8 308 aa13.92□□□□□ -0.18
CKS2-201ENST00000314355 SFI1A8K8P3 1242 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 SLC16A4O15374 487 aa13.91□□□□□ -0.18
CKS2-201ENST00000314355 PLA2G4BP0C869 781 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms