RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 GUCY2FP51841 1108 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 SMTNP53814 917 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 ASIC1P78348 528 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 NUCB2P80303 420 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 EP400NLQ6ZTU2 488 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 COLGALT2Q8IYK4 626 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 C18orf25Q96B23 403 aaPredicted RBP13.2□□□□□ -0.3
SCFD1-201ENST00000311943 PGBD4Q96DM1 585 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 BICD1Q96G01 975 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 PAGE5Q96GU1 130 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 STRA6Q9BX79 667 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 C17orf75Q9HAS0 396 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 CDH22Q9UJ99 828 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 SLC26A4O43511 780 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 KLRC4O43908 158 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 FAM189A1O60320 539 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 GCNT3O95395 438 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 CXCL8P10145 99 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 PDIA4P13667 645 aaKnown RBP13.2□□□□□ -0.3
SCFD1-201ENST00000311943 ACOT2P49753 483 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 GTF2BQ00403 316 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 STRN3Q13033 797 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 SLC10A6Q3KNW5 377 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 PLPP4Q5VZY2 271 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 KANK3Q6NY19 840 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 MICAL1Q8TDZ2 1067 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 MRPL38Q96DV4 380 aaKnown RBP13.2□□□□□ -0.3
SCFD1-201ENST00000311943 ZNF558Q96NG5 402 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 C11orf84Q9BUA3 381 aaPredicted RBP13.2□□□□□ -0.3
SCFD1-201ENST00000311943 TIPINQ9BVW5 301 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
SCFD1-201ENST00000311943 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
SCFD1-201ENST00000311943 I3L4J1 428 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
SCFD1-201ENST00000311943 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
SCFD1-201ENST00000311943 MATR3P43243 847 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■□□ 19
SCFD1-201ENST00000311943 KCNQ1P51787 676 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 HYAL1Q12794 435 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
SCFD1-201ENST00000311943 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 C3orf58Q8NDZ4 430 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 PCIF1Q9H4Z3 704 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 SLC39A2Q9NP94 309 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 PCDHB12Q9Y5F1 795 aa13.19□□□□□ -0.3
SCFD1-201ENST00000311943 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 H3BQ06 376 aaPredicted RBP13.18□□□□□ -0.3
SCFD1-201ENST00000311943 C2CD2LO14523 706 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 HOXA2O43364 376 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 GTPBP6O43824 516 aaPredicted RBP13.18□□□□□ -0.3
SCFD1-201ENST00000311943 SKIP12755 728 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 LAG3P18627 525 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
SCFD1-201ENST00000311943 ALDH7A1P49419 539 aaKnown RBP13.18□□□□□ -0.3
SCFD1-201ENST00000311943 LIG4P49917 911 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 CDR1P51861 262 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 DSC1Q08554 894 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 CLUL1Q15846 466 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 NELFCDQ8IXH7 590 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 CNNM3Q8NE01 707 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 VN1R2Q8NFZ6 395 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 SAAL1Q96ER3 474 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 IGSF21Q96ID5 467 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 ADPGKQ9BRR6 497 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 GPR62Q9BZJ7 368 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 SMIM28A0A1B0GU29 152 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 CLDN3O15551 220 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 TOM1L1O75674 476 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 RB1P06400 928 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 CA8P35219 290 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 SYKP43405 635 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 NRIP1P48552 1158 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 PCBP1Q15365 356 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCFD1-201ENST00000311943 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 P2RX5Q93086 422 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 CCDC51Q96ER9 411 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 CBWD1Q9BRT8 395 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 SCAND2PQ9GZW5 306 aaPredicted RBP13.18□□□□□ -0.3
SCFD1-201ENST00000311943 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 TUBGCP4Q9UGJ1 667 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 MAPK8IP1Q9UQF2 711 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
SCFD1-201ENST00000311943 ZNF202O95125 648 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 KIF4AO95239 1232 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 SLFN14P0C7P3 912 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 GRM5P41594 1212 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 CLCNKBP51801 687 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 MCL1Q07820 350 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 EHHADHQ08426 723 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 STK4Q13043 487 aa13.17□□□□□ -0.3
SCFD1-201ENST00000311943 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
SCFD1-201ENST00000311943 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms