RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TMEM237Q96Q45 408 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 NT5C1AQ9BXI3 368 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EPC1Q9H2F5 836 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 NHEJ1Q9H9Q4 299 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 EFCC1Q9HA90 598 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 UBE2TQ9NPD8 197 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RPRD1BQ9NQG5 326 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 MPP6Q9NZW5 540 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SEPT10Q9P0V9 454 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 UVRAGQ9P2Y5 699 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 NRBP1Q9UHY1 535 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 MAPRE3Q9UPY8 281 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 XYLBO75191 536 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ZBTB7AO95365 584 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 URODP06132 367 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PLCG1P19174 1290 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 ERCC3P19447 782 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 MCAMP43121 646 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SERPINB4P48594 390 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 AARS2Q5JTZ9 985 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 RIBC1Q8N443 379 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SNX19Q92543 992 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 HSPH1Q92598 858 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 LXNQ9BS40 222 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 VTA1Q9NP79 307 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 PRDM5Q9NQX1 630 aaPredicted RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 KCTD5Q9NXV2 234 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 MTMR4Q9NYA4 1195 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 SERTAD1Q9UHV2 236 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 TPX2Q9ULW0 747 aaKnown RBP3.38□□□□□ -1.87
CLOCK-201ENST00000309964 IFT172Q9UG01 1749 aa3.38□□□□□ -1.87
CLOCK-201ENST00000309964 MAP3K13O43283 966 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GTF2H1P32780 548 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PCK1P35558 622 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GRK3P35626 688 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NAMPTP43490 491 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MAPK9P45984 424 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NAA20P61599 178 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 IRX5P78411 483 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MYBPC2Q14324 1141 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NFIXQ14938 502 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CCDC144BQ3MJ40 725 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TBC1D1Q86TI0 1168 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF248Q8NDW4 579 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TBC1D16Q8TBP0 767 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MAGEC3Q8TD91 643 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GMCL1Q96IK5 515 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 XPO6Q96QU8 1125 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 HMX1Q9NP08 348 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SUCLA2Q9P2R7 463 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 VPS51Q9UID3 782 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ARHGAP26Q9UNA1 814 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PIN4Q9Y237 131 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 C17orf102A2RUQ5 167 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 QSOX1O00391 747 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NVLO15381 856 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SLC16A3O15427 465 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RAG1P15918 1043 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 SLC11A2P49281 568 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TUFMP49411 452 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ARL4CP56559 192 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 KCNQ4P56696 695 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 FBXW4P57775 412 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 YWHAGP61981 247 aaKnown RBP eCLIP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 TGM3Q08188 693 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZBTB17Q13105 803 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 IMPG1Q17R60 797 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RABGAP1LQ5R372 815 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 BSPRYQ5W0U4 402 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NXNQ6DKJ4 435 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PRR5LQ6MZQ0 368 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 RWDD4Q6NW29 188 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NLRP9Q7RTR0 991 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF438Q7Z4V0 828 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ADGRF4Q8IZF3 695 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MRPS31Q92665 395 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 FGD4Q96M96 766 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 USP28Q96RU2 1077 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 KRCC1Q9NPI7 259 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 HACD3Q9P035 362 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 VPS18Q9P253 973 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 DNPEPQ9ULA0 475 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZNF839A8K0R7 811 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ITGA4P13612 1032 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 GRIK1P39086 918 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 COPS2P61201 443 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 OCRLQ01968 901 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CUL4AQ13619 759 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 DHX34Q14147 1143 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 C12orf60Q5U649 245 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ALKBH5Q6P6C2 394 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 CYB5D1Q6P9G0 228 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 MICALL2Q8IY33 904 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PPWD1Q96BP3 646 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NSUN4Q96CB9 384 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 PIGSQ96S52 555 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 ZCCHC2Q9C0B9 1178 aaKnown RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 BRD8Q9H0E9 1235 aa3.37□□□□□ -1.87
CLOCK-201ENST00000309964 FAM49AQ9H0Q0 323 aaPredicted RBP3.37□□□□□ -1.87
CLOCK-201ENST00000309964 NGRNQ9NPE2 291 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms