RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 HGSO14964 777 aaPredicted RBP26.16■■□□□ 1.78
SPTSSA-201ENST00000298130 RASSF9O75901 435 aa26.16■■□□□ 1.78
SPTSSA-201ENST00000298130 CAP2P40123 477 aa26.16■■□□□ 1.78
SPTSSA-201ENST00000298130 HEMGNQ9BXL5 484 aa26.16■■□□□ 1.78
SPTSSA-201ENST00000298130 RASGRF2O14827 1237 aa26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 DLGAP5Q15398 846 aa26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 PPP2R5EQ16537 467 aa26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 GPATCH11Q8N954 259 aa26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 CNOT10Q9H9A5 744 aaKnown RBP26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 ASTN2O75129 1339 aaPredicted RBP26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 SRRM3A6NNA2 597 aaPredicted RBP26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 SMTNP53814 917 aa26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 CPA5Q8WXQ8 436 aa26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 ASIC3Q9UHC3 531 aa26.15■■□□□ 1.78
SPTSSA-201ENST00000298130 APBA3O96018 575 aa26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 AUHQ13825 339 aaKnown RBP26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 HELQQ8TDG4 1101 aa26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 IPO4Q8TEX9 1081 aaKnown RBP26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 RPS6KC1Q96S38 1066 aa26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 WNT8AQ9H1J5 351 aa26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 ANAPC7Q9UJX3 599 aa26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 RBBP6Q7Z6E9 1792 aaKnown RBP26.14■■□□□ 1.78
SPTSSA-201ENST00000298130 CNGA1P29973 690 aa26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 GJC1P36383 396 aa26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 FKBP1AP62942 108 aaKnown RBP26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 FAM133BQ5BKY9 247 aaKnown RBP26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 BSNDQ8WZ55 320 aa26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 CCT6BQ92526 530 aa26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 PGM2Q96G03 612 aa26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 SCLT1Q96NL6 688 aa26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 CDC42EP4Q9H3Q1 356 aaKnown RBP26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 PFASO15067 1338 aa26.14■■□□□ 1.77
SPTSSA-201ENST00000298130 TESPA1A2RU30 521 aaPredicted RBP26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 PODXLO00592 558 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 RFX1P22670 979 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 DRG2P55039 364 aaKnown RBP26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 HADHBP55084 474 aaKnown RBP26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 GTF2BQ00403 316 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 KRT17Q04695 432 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 SEPT14Q6ZU15 432 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 FUKQ8N0W3 1084 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 CLEC4DQ8WXI8 215 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 AKT1S1Q96B36 256 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 MTUS1Q9ULD2 1270 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 DENND3A2RUS2 1198 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 CCNE2O96020 404 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 PDE6CP51160 858 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 CDR1P51861 262 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 RWDD2BP57060 319 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 TNIP1Q15025 636 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 SGO2Q562F6 1265 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 ANKRD42Q8N9B4 389 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 CCDC197Q8NCU1 140 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 SHC3Q92529 594 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 CEP89Q96ST8 783 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 GGA2Q9UJY4 613 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 CNTNAP1P78357 1384 aa26.13■■□□□ 1.77
SPTSSA-201ENST00000298130 ECEL1O95672 775 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 MFAP3P55082 362 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 CYB5D1Q6P9G0 228 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 PARD3BQ8TEW8 1205 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 TBK1Q9UHD2 729 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 TCEAL9Q9UHQ7 104 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 TP73O15350 636 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 TRAF1Q13077 416 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 EXOC3L1Q86VI1 746 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 CEP57Q86XR8 500 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 FMNL3Q8IVF7 1028 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 FAM151AQ8WW52 585 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 ART4Q93070 314 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 AAASQ9NRG9 546 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 NPTX2P47972 431 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 KRT39Q6A163 491 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 TBX20Q9UMR3 447 aa26.12■■□□□ 1.77
SPTSSA-201ENST00000298130 PASKQ96RG2 1323 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 MUTP22033 750 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 HSD17B4P51659 736 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 CALCOCO2Q13137 446 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 C6orf118Q5T5N4 469 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 PASD1Q8IV76 773 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 ZKSCAN4Q969J2 545 aaPredicted RBP26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 FEM1BQ9UK73 627 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 R3HDM2Q9Y2K5 976 aaKnown RBP26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 GJB6O95452 261 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 RPS6P62753 249 aaKnown RBP26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 KYNUQ16719 465 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 SV2AQ7L0J3 742 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 POMGNT1Q8WZA1 660 aa26.11■■□□□ 1.77
SPTSSA-201ENST00000298130 CYP1A2P05177 515 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 ICAM1P05362 532 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 CFHP08603 1231 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 GZMAP12544 262 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 RARGP13631 454 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 MAPK4P31152 587 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 CDR2Q01850 454 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 SLC39A4Q6P5W5 647 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 GDAP1Q8TB36 358 aa26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 SYTL5Q8TDW5 730 aaPredicted RBP26.1■■□□□ 1.77
SPTSSA-201ENST00000298130 RAB20Q9NX57 234 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms