RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCDC26Q8TAB7 109 aa19.72■□□□□ 0.75
PDLIM3-201ENST00000284767 SEC14L1Q92503 715 aa19.72■□□□□ 0.75
PDLIM3-201ENST00000284767 IWS1Q96ST2 819 aa19.72■□□□□ 0.75
PDLIM3-201ENST00000284767 NEUROG2Q9H2A3 272 aa19.72■□□□□ 0.75
PDLIM3-201ENST00000284767 SUCLA2Q9P2R7 463 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-201ENST00000284767 NENFQ9UMX5 172 aa19.72■□□□□ 0.75
PDLIM3-201ENST00000284767 AGTPBP1Q9UPW5 1226 aa19.72■□□□□ 0.75
PDLIM3-201ENST00000284767 KRIT1O00522 736 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 UBA1P22314 1058 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 GPR162Q16538 588 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 WDR78Q5VTH9 848 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 DDX42Q86XP3 938 aaKnown RBP eCLIP19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 SYCE1Q8N0S2 351 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 UBLCP1Q8WVY7 318 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 MKNK1Q9BUB5 465 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 AP1M1Q9BXS5 423 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 INTUQ9ULD6 942 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 CXCL11O14625 94 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 SUPT20HL2P0C7V6 817 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 BFSP1Q12934 665 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 MKRN3Q13064 507 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 OTUD6AQ7L8S5 288 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 PEX26Q7Z412 305 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 PLEKHO2Q8TD55 490 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 DDX47Q9H0S4 455 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 TMEM206Q9H813 350 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 HSPBP1Q9NZL4 362 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 KCNH4Q9UQ05 1017 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
PDLIM3-201ENST00000284767 DENND3A2RUS2 1198 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 STAM2O75886 525 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 ADSSP30520 456 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 ODF2Q5BJF6 829 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 SPDYCQ5MJ68 293 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 TMC3Q7Z5M5 1100 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 VPS36Q86VN1 386 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 P3H4Q92791 437 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 SAAL1Q96ER3 474 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 SLC40A1Q9NP59 571 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 CYP26B1Q9NR63 512 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 FAM114A2Q9NRY5 505 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 FBXO40Q9UH90 709 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 STXBP5LQ9Y2K9 1186 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 GLTPD2A6NH11 291 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 CYP2C8P10632 490 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 MAPTP10636 758 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 CDR1P51861 262 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 DMP1Q13316 513 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 PPIL2Q13356 520 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 LY6KQ17RY6 165 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 MAP1SQ66K74 1059 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 MIS18BP1Q6P0N0 1132 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 KMT5AQ9NQR1 393 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 TBX20Q9UMR3 447 aa19.7■□□□□ 0.74
PDLIM3-201ENST00000284767 TMCO5BA8MYB1 307 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 RDXP35241 583 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 TAX1BP1Q86VP1 789 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 SLC9A9Q8IVB4 645 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 GPATCH11Q8N954 259 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 ZC3H15Q8WU90 426 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 CCDC114Q96M63 670 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 JPH2Q9BR39 696 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 GOLPH3Q9H4A6 298 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 MYH9P35579 1960 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 IGSF9BQ9UPX0 1349 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 LOC102724159A0A0B4J2E5 919 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 PPP3CAQ08209 521 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 PWP2Q15269 919 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 TMEM63BQ5T3F8 832 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 GPAT2Q6NUI2 795 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 SEC16BQ96JE7 1060 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 CNOT10Q9H9A5 744 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 BCCIPQ9P287 314 aaKnown RBP eCLIP19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 ARID2Q68CP9 1835 aa19.69■□□□□ 0.74
PDLIM3-201ENST00000284767 EMSYQ7Z589 1322 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 DAPK3O43293 454 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 ARIH2O95376 493 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 ADRB2P07550 413 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 H2AFZP0C0S5 128 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 ICAM3P32942 547 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 GCLMP48507 274 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 EIF3BP55884 814 aaKnown RBP19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 H2AFVQ71UI9 128 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 CBWD2Q8IUF1 395 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 CACNA2D3Q8IZS8 1091 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 TMEM143Q96AN5 459 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 FAM84AQ96KN4 292 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 FGD4Q96M96 766 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 CXorf56Q9H5V9 222 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 ZNF302Q9NR11 478 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 PDLIM7Q9NR12 457 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 AMACRQ9UHK6 382 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 TTC7AQ9ULT0 858 aaPredicted RBP19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 NOVA2Q9UNW9 492 aaKnown RBP19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 EDNRBP24530 442 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 TMOD1P28289 359 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 C1orf220Q5T0J3 134 aa19.68■□□□□ 0.74
PDLIM3-201ENST00000284767 SLC39A4Q6P5W5 647 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms