RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PARD3BQ8TEW8 1205 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 KAT2BQ92831 832 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 CCDC127Q96BQ5 260 aa22.69■■□□□ 1.22
YBX3-202ENST00000279550 JPH2Q9BR39 696 aaPredicted RBP22.69■■□□□ 1.22
YBX3-202ENST00000279550 LRRIQ4A6NIV6 560 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 H0YCG3 227 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 EDN1P05305 212 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 GARTP22102 1010 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 NAMPTP43490 491 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 CYP24A1Q07973 514 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 HSP90AA2PQ14568 343 aaPredicted RBP22.68■■□□□ 1.22
YBX3-202ENST00000279550 TXLNBQ8N3L3 684 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 LNX1Q8TBB1 728 aaPredicted RBP22.68■■□□□ 1.22
YBX3-202ENST00000279550 RABGGTAQ92696 567 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 SEMA4DQ92854 862 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 SYT11Q9BT88 431 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 UPF3AQ9H1J1 476 aaKnown RBP22.68■■□□□ 1.22
YBX3-202ENST00000279550 NAGPAQ9UK23 515 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 COL1A2P08123 1366 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 MYADML2A6NDP7 307 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 PMM2O15305 246 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 KIAA0753Q2KHM9 967 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 GPD1LQ8N335 351 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 DNAJC5GQ8N7S2 189 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 TMC2Q8TDI7 906 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 KCNN1Q92952 543 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 FAM84AQ96KN4 292 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 ARID3AQ99856 593 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 HAPLN2Q9GZV7 340 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 PDCL3Q9H2J4 239 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 SPC25Q9HBM1 224 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 UBE2TQ9NPD8 197 aaPredicted RBP22.68■■□□□ 1.22
YBX3-202ENST00000279550 LUC7LQ9NQ29 371 aaKnown RBP22.68■■□□□ 1.22
YBX3-202ENST00000279550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.68■■□□□ 1.22
YBX3-202ENST00000279550 JRKLQ9Y4A0 524 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 DAAM1Q9Y4D1 1078 aa22.68■■□□□ 1.22
YBX3-202ENST00000279550 TULP1O00294 542 aaPredicted RBP22.67■■□□□ 1.22
YBX3-202ENST00000279550 FOXN3O00409 490 aaPredicted RBP22.67■■□□□ 1.22
YBX3-202ENST00000279550 ZNF185O15231 689 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 NCK2O43639 380 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 C22orf31O95567 290 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 PGK1P00558 417 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 MYL3P08590 195 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 ANXA13P27216 316 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 IGBP1P78318 339 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 NKX3-2P78367 333 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 CAPSQ13938 189 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 LRRC71Q8N4P6 559 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 RNF10Q8N5U6 811 aaKnown RBP22.67■■□□□ 1.22
YBX3-202ENST00000279550 DEPTORQ8TB45 409 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 KAT5Q92993 513 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 CAPZA3Q96KX2 299 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 NOX5Q96PH1 765 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 MMS19Q96T76 1030 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 FAM213AQ9BRX8 229 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 SUGCTQ9HAC7 445 aa22.67■■□□□ 1.22
YBX3-202ENST00000279550 GRK4P32298 578 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 LIG4P49917 911 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 PURAQ00577 322 aaKnown RBP22.66■■□□□ 1.22
YBX3-202ENST00000279550 PPFIA1Q13136 1202 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 MKRN4PQ13434 485 aaPredicted RBP22.66■■□□□ 1.22
YBX3-202ENST00000279550 GNASQ5JWF2 1037 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 IER5Q5VY09 327 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 ALKBH5Q6P6C2 394 aaKnown RBP22.66■■□□□ 1.22
YBX3-202ENST00000279550 GPR161Q8N6U8 529 aaKnown RBP22.66■■□□□ 1.22
YBX3-202ENST00000279550 SLC30A5Q8TAD4 765 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 TCP11Q8WWU5 503 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 ALS2CR12Q96Q35 445 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 XPNPEP3Q9NQH7 507 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 KCNG1Q9UIX4 513 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 SNX12Q9UMY4 172 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 PTCH2Q9Y6C5 1203 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 BRCA2P51587 3418 aa22.66■■□□□ 1.22
YBX3-202ENST00000279550 CTAGE15A4D2H0 777 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 PDE2AO00408 941 aaPredicted RBP22.65■■□□□ 1.22
YBX3-202ENST00000279550 INHAP05111 366 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 CTAGE8P0CG41 777 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 RFX1P22670 979 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 CETN1Q12798 172 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 MFSD10Q14728 455 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 GRIK4Q16099 956 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 CTAGE6Q86UF2 777 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 CTAGE4Q8IX94 777 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 NOA1Q8NC60 698 aaKnown RBP22.65■■□□□ 1.22
YBX3-202ENST00000279550 U2AF1L4Q8WU68 220 aaKnown RBP22.65■■□□□ 1.22
YBX3-202ENST00000279550 ZBTB45Q96K62 511 aaPredicted RBP22.65■■□□□ 1.22
YBX3-202ENST00000279550 KATNAL1Q9BW62 490 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 ZNF446Q9NWS9 450 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 STYXL1Q9Y6J8 313 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 HAS3O00219 553 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 MAGEB2O15479 319 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 KPNA6O60684 536 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 ADAMTS4O75173 837 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 PIGRP01833 764 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 CLCN6P51797 869 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 WNT7BP56706 349 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 STRN3Q13033 797 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 C10orf76Q5T2E6 689 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 EFCAB12Q6NXP0 572 aa22.65■■□□□ 1.22
YBX3-202ENST00000279550 PRPF31Q8WWY3 499 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms