RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 FYB2Q5VWT5 728 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 APBB1IPQ7Z5R6 666 aaPredicted RBP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 SRRM1Q8IYB3 904 aaKnown RBP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 KCTD6Q8NC69 237 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 SLC20A1Q8WUM9 679 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 HNRNPLLQ8WVV9 542 aaKnown RBP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 DGAT1O75907 488 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 GJC2Q5T442 439 aaPredicted RBP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 SYCP2LQ5T4T6 812 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 C6orf163Q5TEZ5 329 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 FAM117BQ6P1L5 589 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 CEP128Q6ZU80 1094 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 FAM47EQ6ZV65 393 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 OTOP1Q7RTM1 612 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 NME8Q8N427 588 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 TMEM35BQ8NCS4 154 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 ATP6V1G3Q96LB4 118 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 SMC6Q96SB8 1091 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 SIK3Q9Y2K2 1263 aa15.3■□□□□ 0.04
TMEM47-201ENST00000275954 REXO2Q9Y3B8 237 aaKnown RBP15.3■□□□□ 0.04
TMEM47-201ENST00000275954 ICAM1P05362 532 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 MMEP08473 750 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 LRRC55Q6ZSA7 311 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 ERO1BQ86YB8 467 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 MMGT1Q8N4V1 131 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 SLC35C1Q96A29 364 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 MED10Q9BTT4 135 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 SAYSD1Q9NPB0 183 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.29■□□□□ 0.04
TMEM47-201ENST00000275954 KCPQ6ZWJ8 1503 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 ITGA4P13612 1032 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 SMAD1Q15797 465 aaKnown RBP15.29■□□□□ 0.04
TMEM47-201ENST00000275954 FASTKD5Q7L8L6 764 aaKnown RBP15.29■□□□□ 0.04
TMEM47-201ENST00000275954 CCDC110Q8TBZ0 833 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 DHX38Q92620 1227 aaKnown RBP15.29■□□□□ 0.04
TMEM47-201ENST00000275954 TBC1D31Q96DN5 1066 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 ACP6Q9NPH0 428 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.29■□□□□ 0.04
TMEM47-201ENST00000275954 GLTPD2A6NH11 291 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 RTN2O75298 545 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 SGPL1O95470 568 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 LDHAP00338 332 aaKnown RBP15.29■□□□□ 0.04
TMEM47-201ENST00000275954 ANKRD20A3Q5VUR7 823 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 IDI2Q9BXS1 227 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 TMEM117Q9H0C3 514 aa15.29■□□□□ 0.04
TMEM47-201ENST00000275954 EIF3DO15371 548 aaKnown RBP eCLIP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 ATN1P54259 1190 aaPredicted RBP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 E2F5Q15329 346 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 MEA1Q16626 185 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 MKNK1Q9BUB5 465 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 SLITRK6Q9H5Y7 841 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 GBP1P32455 592 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 MAN1A1P33908 653 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 KCNMA1Q12791 1236 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 SLC35G1Q2M3R5 365 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 WDR72Q3MJ13 1102 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 XKR3Q5GH77 459 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 CASKIN2Q8WXE0 1202 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 P3H4Q92791 437 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 SPATA33Q96N06 139 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 ABCC6O95255 1503 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 SAT1P21673 171 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 CA4P22748 312 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 DARS2Q6PI48 645 aaKnown RBP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 MMS22LQ6ZRQ5 1243 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 GMCL1P1Q8NEA9 526 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 C9orf72Q96LT7 481 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 JPH2Q9BR39 696 aaPredicted RBP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 MOV10L1Q9BXT6 1211 aaKnown RBP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 PDHXO00330 501 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 PBX1P40424 430 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 KIAA1755Q5JYT7 1200 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 PRAMEF19Q5SWL8 479 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 WDR93Q6P2C0 686 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 TRIM50Q86XT4 487 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 FBXO16Q8IX29 292 aaPredicted RBP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 SYTL5Q8TDW5 730 aaPredicted RBP15.28■□□□□ 0.04
TMEM47-201ENST00000275954 TAS1R2Q8TE23 839 aa15.28■□□□□ 0.04
TMEM47-201ENST00000275954 A0A087WUV0 522 aaPredicted RBP15.27■□□□□ 0.04
TMEM47-201ENST00000275954 F5H423 210 aaPredicted RBP15.27■□□□□ 0.04
TMEM47-201ENST00000275954 WEE2P0C1S8 567 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 CHRNA3P32297 505 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 SLC12A3P55017 1021 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 NAA25Q14CX7 972 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 Q4G0T1 1027 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 BBOF1Q8ND07 529 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 FAM84AQ96KN4 292 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 RILPQ96NA2 401 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 KIAA1586Q9HCI6 787 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 GGT7Q9UJ14 662 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 HEY1Q9Y5J3 304 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.04
TMEM47-201ENST00000275954 HLA-DRAP01903 254 aa15.27■□□□□ 0.03
TMEM47-201ENST00000275954 PTPRAP18433 802 aa15.27■□□□□ 0.03
TMEM47-201ENST00000275954 CIITAP33076 1130 aa15.27■□□□□ 0.03
TMEM47-201ENST00000275954 NPTX2P47972 431 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms