RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 TLR10Q9BXR5 811 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 NAGPAQ9UK23 515 aa12.28□□□□□ -0.44
VPS33A-201ENST00000267199 PITPNM2Q9BZ72 1349 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 CDH16O75309 829 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 GPC4O75487 556 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 ANKRD20A8PQ5CZ79 823 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 CREG2Q8IUH2 290 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 PDZD8Q8NEN9 1154 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 CXorf38Q8TB03 319 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 ZKSCAN4Q969J2 545 aaPredicted RBP12.27□□□□□ -0.44
VPS33A-201ENST00000267199 GRAMD1AQ96CP6 724 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 LRGUKQ96M69 825 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 SLC13A1Q9BZW2 595 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 NYAP2Q9P242 653 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 ALG6Q9Y672 507 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 IVNS1ABPQ9Y6Y0 642 aa12.27□□□□□ -0.44
VPS33A-201ENST00000267199 PI4K2BG5E9Z4 385 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 TBX3O15119 743 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 DNAJC6O75061 913 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 PHF2O75151 1096 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 PSAPP07602 524 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CCND2P30279 289 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CPA2P48052 419 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 MIS18BP1Q6P0N0 1132 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 LDHDQ86WU2 507 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 NME8Q8N427 588 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CALR3Q96L12 384 aaKnown RBP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 MSTO1Q9BUK6 570 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 HESX1Q9UBX0 185 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 JCADQ9P266 1359 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 SLC16A3O15427 465 aaKnown RBP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CYTH3O43739 400 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 TMEM270Q6UE05 265 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 FUKQ8N0W3 1084 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CAVIN3Q969G5 261 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CRAMP1Q96RY5 1269 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 PABPC3Q9H361 631 aaKnown RBP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 XAB2Q9HCS7 855 aaKnown RBP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 TUFT1Q9NNX1 390 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 TBC1D22BQ9NU19 505 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 MARCOQ9UEW3 520 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 PRR12Q9ULL5 1215 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 PFASO15067 1338 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 RSPH10BP0C881 870 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 PRLRP16471 622 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 ARL4CP56559 192 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 NR1H3Q13133 447 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 RAPH1Q70E73 1250 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 WDR75Q8IWA0 830 aaKnown RBP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 KCTD6Q8NC69 237 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 TEKT4Q8WW24 435 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 SYN2Q92777 582 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 RBM15Q96T37 977 aaKnown RBP eCLIP12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CSADQ9Y600 493 aa12.27□□□□□ -0.45
VPS33A-201ENST00000267199 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 WNT7AO00755 349 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 MED24O75448 989 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 CDK17Q00537 523 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 MKRN3Q13064 507 aaKnown RBP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 TRIM56Q9BRZ2 755 aaKnown RBP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 FOXP2O15409 715 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 TJP3O95049 919 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 ENO1P06733 434 aaKnown RBP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 JAK3P52333 1124 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 ESRRGP62508 458 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 ERVK-9P63128 1117 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 NOP14P78316 857 aaKnown RBP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 PHEXP78562 749 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 DYNC1I2Q13409 638 aaKnown RBP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 FAM160B1Q5W0V3 765 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 ATG16L1Q676U5 607 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 AGGF1Q8N302 714 aaeCLIP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 MCUQ8NE86 351 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 MCPH1Q8NEM0 835 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 TPCN2Q8NHX9 752 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 RTFDC1Q9BY42 306 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 WNT8AQ9H1J5 351 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 THEGQ9P2T0 379 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 BCL9O00512 1426 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 COL5A2P05997 1499 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-201ENST00000267199 KRT37O76014 449 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 ZWINTO95229 277 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 SRGAP2CP0DJJ0 459 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 COMTP21964 271 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 CUL3Q13618 768 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 RASSF3Q86WH2 238 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 HAO1Q9UJM8 370 aa12.26□□□□□ -0.45
VPS33A-201ENST00000267199 LPXNO60711 386 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 RFX1P22670 979 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 ECE1P42892 770 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 AP2B1P63010 937 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 CAV1Q03135 178 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 TRIM50Q86XT4 487 aa12.25□□□□□ -0.45
VPS33A-201ENST00000267199 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms