RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 NEDD1Q8NHV4 660 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 DNAJC9Q8WXX5 260 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 SGSM3Q96HU1 749 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 CCDC90BQ9GZT6 254 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 LACRTQ9GZZ8 138 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 TMEM117Q9H0C3 514 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 TAC1P20366 129 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 CRKP46108 304 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 STAMBPL1Q96FJ0 436 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 TRIM15Q9C019 465 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 TDRD3Q9H7E2 651 aaKnown RBP20.63■□□□□ 0.89
FAM20B-201ENST00000263733 STRIP2Q9ULQ0 834 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 L3MBTL1Q9Y468 752 aa20.63■□□□□ 0.89
FAM20B-201ENST00000263733 A0A1W2PQJ5 194 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 GOLGA8CPA6NN73 597 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 KRT7P08729 469 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 KDM7AQ6ZMT4 941 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 MCPH1Q8NEM0 835 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 SPDYE2BA6NHP3 402 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 SPDYE6P0CI01 402 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 COMTP21964 271 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 COA1Q9GZY4 146 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 UBTFL6P0CB48 400 aaPredicted RBP20.62■□□□□ 0.89
FAM20B-201ENST00000263733 ITIH2P19823 946 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 ATXN3P54252 364 aaPredicted RBP20.62■□□□□ 0.89
FAM20B-201ENST00000263733 BBS5Q8N3I7 341 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 FAM96AQ9H5X1 160 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 NEU2Q9Y3R4 380 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 ZNF335Q9H4Z2 1342 aaPredicted RBP20.62■□□□□ 0.89
FAM20B-201ENST00000263733 SEC24DO94855 1032 aaPredicted RBP20.62■□□□□ 0.89
FAM20B-201ENST00000263733 CDH6P55285 790 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 NSUN4Q96CB9 384 aaKnown RBP20.62■□□□□ 0.89
FAM20B-201ENST00000263733 THTPAQ9BU02 230 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 KIAA1586Q9HCI6 787 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 GABBR1Q9UBS5 961 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 EYA4O95677 639 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 RFX1P22670 979 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 NCLNQ969V3 563 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 ACAP3Q96P50 834 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 DLGAP2Q9P1A6 1054 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 ALG6Q9Y672 507 aa20.62■□□□□ 0.89
FAM20B-201ENST00000263733 E2F6O75461 281 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 MYBL1P10243 752 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 CYP19A1P11511 503 aaPredicted RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 USP11P51784 963 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 HEATR6Q6AI08 1181 aaKnown RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 SUN2Q9UH99 717 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 ARHGAP10A1A4S6 786 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 CHEK2O96017 543 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 CPA2P48052 419 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 OCA2Q04671 838 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 ZC2HC1CQ53FD0 456 aaPredicted RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 SWSAP1Q6NVH7 229 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 FAM193BQ96PV7 902 aaPredicted RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 SENP1Q9P0U3 644 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 SMG5Q9UPR3 1016 aaKnown RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 CDC42BPBQ9Y5S2 1711 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 PIK3R2O00459 728 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 SUPT3HO75486 399 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 EAPPQ56P03 285 aaPredicted RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 RNF135Q8IUD6 432 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 PARVAQ9NVD7 372 aa20.61■□□□□ 0.89
FAM20B-201ENST00000263733 TFRCP02786 760 aaKnown RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 IRX1P78414 480 aaPredicted RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 FAM102AQ5T9C2 384 aaPredicted RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 TARBP1Q13395 1621 aaKnown RBP20.61■□□□□ 0.89
FAM20B-201ENST00000263733 SDC4P31431 198 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 EIF3EP60228 445 aaKnown RBP20.6■□□□□ 0.89
FAM20B-201ENST00000263733 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 SASH3O75995 380 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 MAP3K14Q99558 947 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 PRDM4Q9UKN5 801 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 NSUN2Q08J23 767 aaKnown RBP eCLIP20.6■□□□□ 0.89
FAM20B-201ENST00000263733 AP1B1Q10567 949 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 RARS2Q5T160 578 aaKnown RBP20.6■□□□□ 0.89
FAM20B-201ENST00000263733 POLR3CQ9BUI4 534 aaPredicted RBP20.6■□□□□ 0.89
FAM20B-201ENST00000263733 HERVK_113P62684 666 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 DNAJC3Q13217 504 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 MED21Q13503 144 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 EFTUD2Q15029 972 aaKnown RBP eCLIP20.6■□□□□ 0.894e-8■■■■■ 42.6
FAM20B-201ENST00000263733 ZNF568Q3ZCX4 644 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 CEP19Q96LK0 163 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 ERGIC2Q96RQ1 377 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 ADGRL3Q9HAR2 1447 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 A0A087X0T9 212 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 FAM228BP0C875 321 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 TARSP26639 723 aaKnown RBP20.6■□□□□ 0.89
FAM20B-201ENST00000263733 ITGA8P53708 1063 aa20.6■□□□□ 0.89
FAM20B-201ENST00000263733 TBXAS1P24557 533 aaPredicted RBP20.59■□□□□ 0.89
FAM20B-201ENST00000263733 CNGA3Q16281 694 aa20.59■□□□□ 0.89
FAM20B-201ENST00000263733 MAPK6Q16659 721 aa20.59■□□□□ 0.89
FAM20B-201ENST00000263733 FOXR1Q6PIV2 292 aa20.59■□□□□ 0.89
FAM20B-201ENST00000263733 RANBP17Q9H2T7 1088 aaKnown RBP20.59■□□□□ 0.89
FAM20B-201ENST00000263733 CPSF3Q9UKF6 684 aaKnown RBP20.59■□□□□ 0.89
FAM20B-201ENST00000263733 SYCE1LA8MT33 242 aa20.59■□□□□ 0.89
FAM20B-201ENST00000263733 H3BRJ5 948 aa20.59■□□□□ 0.89
FAM20B-201ENST00000263733 KRT27Q7Z3Y8 459 aa20.59■□□□□ 0.89
FAM20B-201ENST00000263733 DHX35Q9H5Z1 703 aaKnown RBP20.59■□□□□ 0.89
FAM20B-201ENST00000263733 SPC25Q9HBM1 224 aa20.59■□□□□ 0.89
FAM20B-201ENST00000263733 DDX56Q9NY93 547 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms