RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ASNSP08243 561 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 SUPT20HL1Q3ZLR7 823 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 PALM2Q8IXS6 379 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 LRRC8CQ8TDW0 803 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 DISP2A7MBM2 1401 aa17.28■□□□□ 0.36
PDZRN3-201ENST00000263666 KRT39Q6A163 491 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 TATDN2Q93075 761 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 GLIS2Q9BZE0 524 aaPredicted RBP17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 ETNK1Q9HBU6 452 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 C4AP0C0L4 1744 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 C4BP0C0L5 1744 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 FAM187AA6NFU0 413 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 RTN2O75298 545 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 KRT10P13645 584 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 NT5C2P49902 561 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 ITGA8P53708 1063 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 CDR2LQ86X02 465 aaPredicted RBP17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 ZSWIM1Q9BR11 485 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 CALN1Q9BXU9 219 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 PCSK1NQ9UHG2 260 aa17.27■□□□□ 0.36
PDZRN3-201ENST00000263666 BASP1P80723 227 aaKnown RBP17.27■□□□□ 0.35
PDZRN3-201ENST00000263666 PPATQ06203 517 aa17.27■□□□□ 0.35
PDZRN3-201ENST00000263666 IZUMO3Q5VZ72 239 aa17.27■□□□□ 0.35
PDZRN3-201ENST00000263666 FBXO41Q8TF61 875 aa17.27■□□□□ 0.35
PDZRN3-201ENST00000263666 SRGAP2CP0DJJ0 459 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 PLS3P13797 630 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 COILP38432 576 aaPredicted RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 DHX34Q14147 1143 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 PPP2R5DQ14738 602 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 HHIPL2Q6UWX4 724 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 SLC13A5Q86YT5 568 aaPredicted RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 RUBCNQ92622 972 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 SLC5A5Q92911 643 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 SKAP2O75563 359 aaPredicted RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 OTOP1Q7RTM1 612 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 FBXL13Q8NEE6 735 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 RSAD2Q8WXG1 361 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 TMEM143Q96AN5 459 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 CNOT7Q9UIV1 285 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 RALAP11233 206 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 GPS1Q13098 491 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 RSBN1LQ6PCB5 846 aaPredicted RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 MSL3Q8N5Y2 521 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 SCFD2Q8WU76 684 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 CDC42EP4Q9H3Q1 356 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 ZHX2Q9Y6X8 837 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 RGL2O15211 777 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 AGBL2Q5U5Z8 902 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 ETNPPLQ8TBG4 499 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 SMC6Q96SB8 1091 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
PDZRN3-201ENST00000263666 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 SLIT2O94813 1529 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 A0A0G2JND7 137 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 TLR3O15455 904 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 RARAP10276 462 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 HSPA6P17066 643 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 HOXA10P31260 410 aaPredicted RBP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 SLC8A1P32418 973 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 PTENP60484 403 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 YWHAGP61981 247 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 DNAJC3Q13217 504 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 TRPM8Q7Z2W7 1104 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 VPS52Q8N1B4 723 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 GRK7Q8WTQ7 553 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 MCUR1Q96AQ8 359 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 NCAPGQ9BPX3 1015 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 CXorf56Q9H5V9 222 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 TBX3O15119 743 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 UBOX5O94941 541 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 RRM1P23921 792 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 IGBP1P78318 339 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 IL9RQ01113 521 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 SPP2Q13103 211 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 EPM2AIP1Q7L775 607 aaPredicted RBP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 NOP9Q86U38 636 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 ZBED8Q8IZ13 594 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 MAK16Q9BXY0 300 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 MAGED2Q9UNF1 606 aaPredicted RBP17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 DIAPH2O60879 1101 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 YY1P25490 414 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 GCKP35557 465 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 CDO1Q16878 200 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 CROCCP2Q86T23 111 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 GINM1Q9NU53 330 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 ABCF3Q9NUQ8 709 aa17.25■□□□□ 0.35
PDZRN3-201ENST00000263666 TRAPPC3O43617 180 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 CNGA1P29973 690 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 RCN2Q14257 317 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SAMD7Q7Z3H4 446 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 POLR3CQ9BUI4 534 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms