RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 LMNB2Q03252 620 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 SMAD1Q15797 465 aaKnown RBP18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 RASIP1Q5U651 963 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 TRMT10CQ7L0Y3 403 aaKnown RBP18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 CYFIP1Q7L576 1253 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 COL23A1Q86Y22 540 aaPredicted RBP18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ATL2Q8NHH9 583 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 TRABDQ9H4I3 376 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 GINS2Q9Y248 185 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 MYH6P13533 1939 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 TUBGCP6Q96RT7 1819 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 RALAP11233 206 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ESRRAP11474 423 aaPredicted RBP18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ARSEP51690 589 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 CENPUQ71F23 418 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ZC3H18Q86VM9 953 aaKnown RBP18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 GBP5Q96PP8 586 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 KDM4CQ9H3R0 1056 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 TUFT1Q9NNX1 390 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 NPHS2Q9NP85 383 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 FBXO28Q9NVF7 368 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 H7C0C1 242 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 STAM2O75886 525 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ATP5OP48047 213 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 RHBDL3P58872 404 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ASTE1Q2TB18 679 aaPredicted RBP18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 CBWD2Q8IUF1 395 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 ARHGAP24Q8N264 748 aa18.68■□□□□ 0.58
NDFIP1-201ENST00000253814 RIPK2O43353 540 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 PPP1R11O60927 126 aaPredicted RBP18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 P4HBP07237 508 aaKnown RBP18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 ARP10275 920 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 PAX7P23759 505 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 SHMT1P34896 483 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 SNRNP35Q16560 246 aaKnown RBP18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 PWWP2AQ96N64 755 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 GYG2O15488 501 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 RARAP10276 462 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 DRD4P21917 467 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 ECE1P42892 770 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 KCNJ2P63252 427 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 CFAP157Q5JU67 520 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 ZNF720Q7Z2F6 126 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 YTHDF3Q7Z739 585 aaKnown RBP18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 ZBTB33Q86T24 672 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 PALB2Q86YC2 1186 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 RFX6Q8HWS3 928 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 ARHGEF19Q8IW93 802 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 TRAIPQ9BWF2 469 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 HAO1Q9UJM8 370 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 TMEM150BA6NC51 233 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 M0R2N6 131 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 GGPS1O95749 300 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 ELF3P78545 371 aaPredicted RBP18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 ERMARDQ5T6L9 678 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 HIPK4Q8NE63 616 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 MKNK1Q9BUB5 465 aa18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 RAVER2Q9HCJ3 691 aaKnown RBP18.67■□□□□ 0.58
NDFIP1-201ENST00000253814 A0A0A6YYK5 440 aaPredicted RBP18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 DDTLA6NHG4 134 aaPredicted RBP18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 RBAK-RBAKDNI3L0D1 243 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 ZBED4O75132 1171 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 DCTN3O75935 186 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 ITIH2P19823 946 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 SWT1Q5T5J6 900 aaKnown RBP18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 AP1ARQ63HQ0 302 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 LONP2Q86WA8 852 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 CRYBG1Q9Y4K1 1723 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 KITP10721 976 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 DLG4P78352 724 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 SLC5A5Q92911 643 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 TRIM11Q96F44 468 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 TOPORSQ9NS56 1045 aaPredicted RBP18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 PCSK1NQ9UHG2 260 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 TFAMQ00059 246 aaKnown RBP18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 OVGP1Q12889 678 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 LDHDQ86WU2 507 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 ZNF668Q96K58 619 aaPredicted RBP18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 ASTN1O14525 1302 aa18.66■□□□□ 0.58
NDFIP1-201ENST00000253814 MYH15Q9Y2K3 1946 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 KIAA0391O15091 583 aaKnown RBP18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 PRKCIP41743 596 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 ACOT2P49753 483 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 ZCWPW2Q504Y3 356 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 C3orf20Q8ND61 904 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 UBN1Q9NPG3 1134 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 MYH13Q9UKX3 1938 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 FAM47DPA6NHR8 397 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 EIF3DO15371 548 aaKnown RBP eCLIP18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 HADHQ16836 314 aaKnown RBP18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 RHOT1Q8IXI2 618 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 ZNF341Q9BYN7 854 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 IGSF9BQ9UPX0 1349 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 CLGNO14967 610 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 OPHN1O60890 802 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 ALDH5A1P51649 535 aaPredicted RBP18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 CDR2Q01850 454 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 DAB2IPQ5VWQ8 1189 aa18.65■□□□□ 0.58
NDFIP1-201ENST00000253814 PHLDB3Q6NSJ2 640 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms