RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 PRPF31Q8WWY3 499 aaKnown RBP18.15■□□□□ 0.5
ACTN4-201ENST00000252699 TNIP3Q96KP6 325 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 CFAP57Q96MR6 1250 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 PLAGL2Q9UPG8 496 aa18.15■□□□□ 0.5
ACTN4-201ENST00000252699 ESYT3A0FGR9 886 aa18.14■□□□□ 0.5
ACTN4-201ENST00000252699 CLCN3P51790 818 aa18.14■□□□□ 0.5
ACTN4-201ENST00000252699 OAZ1P54368 228 aa18.14■□□□□ 0.5
ACTN4-201ENST00000252699 ZSCAN26Q16670 478 aa18.14■□□□□ 0.5
ACTN4-201ENST00000252699 CPA5Q8WXQ8 436 aa18.14■□□□□ 0.5
ACTN4-201ENST00000252699 MAGED2Q9UNF1 606 aaPredicted RBP18.14■□□□□ 0.5
ACTN4-201ENST00000252699 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.5
ACTN4-201ENST00000252699 CDKAL1Q5VV42 579 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 PCDHB2Q9Y5E7 798 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 PNMA6AP0CW24 399 aaPredicted RBP18.14■□□□□ 0.49
ACTN4-201ENST00000252699 ALS2CLQ60I27 953 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 SPATA4Q8NEY3 305 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 RILPQ96NA2 401 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 ZBED2Q9BTP6 218 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 NOC2LQ9Y3T9 749 aaKnown RBP18.14■□□□□ 0.49
ACTN4-201ENST00000252699 SARSP49591 514 aaKnown RBP18.14■□□□□ 0.49
ACTN4-201ENST00000252699 MUM1L1Q5H9M0 696 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 CACNA2D3Q8IZS8 1091 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 SLC35G2Q8TBE7 412 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 C18orf8Q96DM3 657 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 CCDC68Q9H2F9 335 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 RANBP17Q9H2T7 1088 aaKnown RBP18.14■□□□□ 0.49
ACTN4-201ENST00000252699 BCL9LQ86UU0 1499 aa18.14■□□□□ 0.49
ACTN4-201ENST00000252699 GRID2IPA4D2P6 1211 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 RASGRF2O14827 1237 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 TBK1Q9UHD2 729 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 SLITRK3O94933 977 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 IL18RAPO95256 599 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 ACSL3O95573 720 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 GUCY2CP25092 1073 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 MSH2P43246 934 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 SEZ6Q53EL9 994 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 CCDC62Q6P9F0 684 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 METTL7BQ6UX53 244 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 KIAA0895Q8NCT3 520 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 ASCC2Q9H1I8 757 aaPredicted RBP18.13■□□□□ 0.49
ACTN4-201ENST00000252699 GARSP41250 739 aaKnown RBP18.13■□□□□ 0.49
ACTN4-201ENST00000252699 RARRES1P49788 294 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 GKAP1Q5VSY0 366 aaPredicted RBP18.13■□□□□ 0.49
ACTN4-201ENST00000252699 CENPUQ71F23 418 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 RNPC3Q96LT9 517 aaKnown RBP18.13■□□□□ 0.49
ACTN4-201ENST00000252699 ABCC6O95255 1503 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 RPS6KA5O75582 802 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 KRT3P12035 628 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 ARHGAP25P42331 645 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 NAMPTP43490 491 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 ATP11AP98196 1134 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 KLHL14Q9P2G3 628 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 CPA4Q9UI42 421 aa18.13■□□□□ 0.49
ACTN4-201ENST00000252699 EXOC1LA0A1B0GW35 172 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 NNTQ13423 1086 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 VGLL4Q14135 290 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 TMED2Q15363 201 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 TRIM65Q6PJ69 517 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 PYROXD1Q8WU10 500 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 SLC5A5Q92911 643 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 CDCA5Q96FF9 252 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 A1CFQ9NQ94 594 aaKnown RBP18.12■□□□□ 0.49
ACTN4-201ENST00000252699 OLFML3Q9NRN5 406 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 BLOC1S4Q9NUP1 217 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 UVRAGQ9P2Y5 699 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 EML1O00423 815 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 AKAP3O75969 853 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 CPT1AP50416 773 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 CNTN2Q02246 1040 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 SPDYE16A6NNV3 312 aaPredicted RBP18.12■□□□□ 0.49
ACTN4-201ENST00000252699 WEE2P0C1S8 567 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 RGS2P41220 211 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 PMS1P54277 932 aaKnown RBP18.12■□□□□ 0.49
ACTN4-201ENST00000252699 PPATQ06203 517 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 SYN2Q92777 582 aaPredicted RBP18.12■□□□□ 0.49
ACTN4-201ENST00000252699 MTMR9Q96QG7 549 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 ADAMTSL3P82987 1691 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 PDHXO00330 501 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 TGFB3P10600 412 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 CHRNA3P32297 505 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 TMEM119Q4V9L6 283 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 MMS22LQ6ZRQ5 1243 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 TRIM59Q8IWR1 403 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 SCYL1Q96KG9 808 aa18.12■□□□□ 0.49
ACTN4-201ENST00000252699 ZNF185O15231 689 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 AP5Z1O43299 807 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 TBC1D12O60347 775 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 TAP1Q03518 808 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 NT5DC1Q5TFE4 455 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 CC2D1AQ6P1N0 951 aaPredicted RBP18.11■□□□□ 0.49
ACTN4-201ENST00000252699 NIPA1Q7RTP0 329 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 GSPT2Q8IYD1 628 aaKnown RBP18.11■□□□□ 0.49
ACTN4-201ENST00000252699 NIF3L1Q9GZT8 377 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 IPO11Q9UI26 975 aaKnown RBP18.11■□□□□ 0.49
ACTN4-201ENST00000252699 NOVA2Q9UNW9 492 aaKnown RBP18.11■□□□□ 0.49
ACTN4-201ENST00000252699 PARP4Q9UKK3 1724 aaKnown RBP18.11■□□□□ 0.49
ACTN4-201ENST00000252699 OGTO15294 1046 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 CLTAP09496 248 aa18.11■□□□□ 0.49
ACTN4-201ENST00000252699 EIF3BP55884 814 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms