RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 NOL4O94818 638 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 FESP07332 822 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 FAM153BP0C7A2 387 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 VEGFAP15692 232 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 HSD17B3P37058 310 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 ATP1A2P50993 1020 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 CALCRLQ16602 461 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 LETM2Q2VYF4 491 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 FAM153CQ494X1 144 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 HIBCHQ6NVY1 386 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 SLFN11Q7Z7L1 901 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 VPS36Q86VN1 386 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 CACNA2D3Q8IZS8 1091 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 ZNF444Q8N0Y2 327 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 REXO1Q8N1G1 1221 aaKnown RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 PNMA5Q96PV4 448 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 TCF12Q99081 682 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 HERC2P3Q9BVR0 1158 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 OXCT2Q9BYC2 517 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 FAM129AQ9BZQ8 928 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 KCTD10Q9H3F6 313 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 FAM153AQ9UHL3 310 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 WNK3Q9BYP7 1800 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 COL14A1Q05707 1796 aaKnown RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 ADAMTS3O15072 1205 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 RAD51CO43502 376 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 NCK2O43639 380 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 CYTH3O43739 400 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 BAG3O95817 575 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 GNRH1P01148 92 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 TSPY3P0CV98 308 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 TSPY8P0CW00 308 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 HIBADHP31937 336 aaKnown RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 TECP42680 631 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 KLHL30Q0D2K2 578 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 GKAP1Q5VSY0 366 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 SH2D3CQ8N5H7 860 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 NKAIN3Q8N8D7 197 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 ATP6V1E2Q96A05 226 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 HERC5Q9UII4 1024 aaKnown RBP16.06■□□□□ 0.16
PMPCB-201ENST00000249269 GAKO14976 1311 aa16.06■□□□□ 0.16
PMPCB-201ENST00000249269 H0YC42 278 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 KLRC1P26715 233 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 KCTD16Q68DU8 428 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 GPIHBP1Q8IV16 184 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 CCHCR1Q8TD31 782 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 ZKSCAN4Q969J2 545 aaPredicted RBP16.05■□□□□ 0.16
PMPCB-201ENST00000249269 PLVAPQ9BX97 442 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 MKNK2Q9HBH9 465 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 SLC40A1Q9NP59 571 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 MCM9Q9NXL9 1143 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 PAIP2BQ9ULR5 123 aaKnown RBP16.05■□□□□ 0.16
PMPCB-201ENST00000249269 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
PMPCB-201ENST00000249269 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 CASQ2O14958 399 aaPredicted RBP16.05■□□□□ 0.16
PMPCB-201ENST00000249269 TLR2O60603 784 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 DNAJB2P25686 324 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 ECHS1P30084 290 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 CD83Q01151 205 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 GBE1Q04446 702 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 CRELD2Q6UXH1 353 aaPredicted RBP16.05■□□□□ 0.16
PMPCB-201ENST00000249269 NPLOC4Q8TAT6 608 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 RAB17Q9H0T7 212 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
PMPCB-201ENST00000249269 ROBO1Q9Y6N7 1651 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 BUB1O43683 1085 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 FLOT1O75955 427 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 KRT13P13646 458 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 EZRP15311 586 aaKnown RBP16.04■□□□□ 0.16
PMPCB-201ENST00000249269 CTNNA1P35221 906 aaKnown RBP16.04■□□□□ 0.16
PMPCB-201ENST00000249269 NR2C2P49116 596 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 SEPHS1P49903 392 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 DRG2P55039 364 aaKnown RBP16.04■□□□□ 0.16
PMPCB-201ENST00000249269 ZNF844Q08AG5 666 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 ITIH4Q14624 930 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 METTL11BQ5VVY1 283 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 FRMD5Q7Z6J6 570 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 LRRC57Q8N9N7 239 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 OR8H1Q8NGG4 311 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 DTNBP1Q96EV8 351 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 MS4A14Q96JA4 679 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 PSKH2Q96QS6 385 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 SIRT5Q9NXA8 310 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 FBXO10Q9UK96 956 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 PLSCR1O15162 318 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 TSPAN6O43657 245 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 CDC25CP30307 473 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 PHEXP78562 749 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 FOXK1P85037 733 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 RIPK1Q13546 671 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 FAM9CQ8IZT9 166 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 SYCP3Q8IZU3 236 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 PGBD3Q8N328 593 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 ANKRD42Q8N9B4 389 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 TBCKQ8TEA7 893 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 TMEM47Q9BQJ4 181 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 GANQ9H2C0 597 aa16.04■□□□□ 0.16
PMPCB-201ENST00000249269 DDX20Q9UHI6 824 aaKnown RBP16.04■□□□□ 0.16
PMPCB-201ENST00000249269 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms