RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CREBRFQ8IUR6 639 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ZNF444Q8N0Y2 327 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 KRT222Q8N1A0 295 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 MNS1Q8NEH6 495 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 KCTD13Q8WZ19 329 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 MRGPRX3Q96LB0 322 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 AK8Q96MA6 479 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ARGLU1Q9NWB6 273 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 BARHL2Q9NY43 387 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 MAD2L2Q9UI95 211 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ST14Q9Y5Y6 855 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TNRC6CQ9HCJ0 1690 aaKnown RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 SBF2Q86WG5 1849 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TAF1LQ8IZX4 1826 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 NAV1Q8NEY1 1877 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 DNAJC25-GNG10A0A024R161 153 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 GPR75-ASB3A0A0A6YYF3 556 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 hCG_1984214I3L0E3 225 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ATP8B1O43520 1251 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 URI1O94763 535 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 RPN1P04843 607 aaKnown RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 FAM153BP0C7A2 387 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TSPY3P0CV98 308 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TSPY8P0CW00 308 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TPP2P29144 1249 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 BMP8BP34820 402 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 RFC4P35249 363 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 NOVP48745 357 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ADKP55263 362 aaKnown RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 DMTNQ08495 405 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 IL17AQ16552 155 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 PLEKHG4Q58EX7 1191 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 RRAGBQ5VZM2 374 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 WWC2Q6AWC2 1192 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 KLHL10Q6JEL2 608 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TMTC1Q8IUR5 882 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 SHISA5Q8N114 240 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ZNF713Q8N859 430 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 ZNF513Q8N8E2 541 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 CNBD1Q8NA66 436 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 SH3RF3Q8TEJ3 882 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 NOC3LQ8WTT2 800 aaKnown RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 HSPA12BQ96MM6 686 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 DUSP15Q9H1R2 295 aaPredicted RBP8.75□□□□□ -1.01
CXCR4-201ENST00000241393 CYP26B1Q9NR63 512 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 VAV3Q9UKW4 847 aa8.75□□□□□ -1.01
CXCR4-201ENST00000241393 TRBV23-1A0A0A0MS06 115 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 ESYT2A0FGR8 921 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 H3BS24 57 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 STXBP3O00186 592 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 NPHP1O15259 732 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 TEX33O43247 280 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 ADCY3O60266 1144 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 IL1R1P14778 569 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 STAT6P42226 847 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 GNG11P61952 73 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 GOLGA8FQ08AF8 430 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 GOLGA8DPQ0D2H9 430 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 STIM1Q13586 685 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 KRT31Q15323 416 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 ERCC6LQ2NKX8 1250 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 CRY2Q49AN0 593 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 GTF2IRD2BQ6EKJ0 949 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 NSMFQ6X4W1 530 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 TOGARAM2Q6ZUX3 1019 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 RASGRP2Q7LDG7 609 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 GTF2IRD2Q86UP8 949 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 NLGN1Q8N2Q7 840 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 TBC1D22AQ8WUA7 517 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 UBE2FQ969M7 185 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 RTFDC1Q9BY42 306 aaPredicted RBP8.74□□□□□ -1.01
CXCR4-201ENST00000241393 ZMYND12Q9H0C1 365 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 ARHGEF4Q9NR80 690 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 MYO1AQ9UBC5 1043 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 DUSP13Q9UII6 198 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 PCDHA6Q9UN73 950 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 CTNND2Q9UQB3 1225 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 PCDHA8Q9Y5H6 950 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 MRFAP1Q9Y605 127 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 FAM205AQ6ZU69 1335 aa8.74□□□□□ -1.01
CXCR4-201ENST00000241393 DDX60LQ5H9U9 1706 aaKnown RBP8.74□□□□□ -1.01
CXCR4-201ENST00000241393 C10orf71Q711Q0 1435 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 PLIN4Q96Q06 1357 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 GAKO14976 1311 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 A0A1W2PQC6 194 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 ESYT3A0FGR9 886 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 MEIS1O00470 390 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 PPP1R12AO14974 1030 aaPredicted RBP8.73□□□□□ -1.01
CXCR4-201ENST00000241393 N4BP3O15049 544 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 RHOBTB3O94955 611 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
CXCR4-201ENST00000241393 EEF1GP26641 437 aaKnown RBP8.73□□□□□ -1.01
CXCR4-201ENST00000241393 GNA11P29992 359 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 UBA7P41226 1012 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 COPB1P53618 953 aaKnown RBP8.73□□□□□ -1.01
CXCR4-201ENST00000241393 STX17P56962 302 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 PRKCQQ04759 706 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 NFIXQ14938 502 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 ARHGAP29Q52LW3 1261 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms