RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 SH3KBP1Q96B97 665 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 SPATA17Q96L03 361 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KCNK16Q96T55 309 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 SARS2Q9NP81 518 aaKnown RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 UBN2Q6ZU65 1347 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 NINQ8N4C6 2090 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 PLEKHG2Q9H7P9 1386 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 GCLMP48507 274 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 PFKFB3Q16875 520 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 LZTS1Q9Y250 596 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 AP4S1Q9Y587 144 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ADGRG1Q9Y653 693 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 C4BPBP20851 252 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ARSEP51690 589 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 MTMR1Q13613 665 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 MAPK6Q16659 721 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 USP17L2Q6R6M4 530 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 RRM2BQ7LG56 351 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 RHPN2Q8IUC4 686 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF341Q9BYN7 854 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 LOC102724428A0A0B4J2F2 783 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 A0A1W2PQC6 194 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 USP27XA6NNY8 438 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 USP17L8P0C7I0 530 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ARPP19P56211 112 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 SIK1P57059 783 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 KRT76Q01546 638 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 PI16Q6UXB8 463 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 BTNL9Q6UXG8 535 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 DNAJC9Q8WXX5 260 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 CCT7Q99832 543 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 FAM49AQ9H0Q0 323 aaPredicted RBP7.12□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF556Q9HAH1 456 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 CDY2AQ9Y6F7 541 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 CDY1Q9Y6F8 540 aa7.12□□□□□ -1.27
CSMD2-201ENST00000241312 RSPH10B2B2RC85 870 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 M0R3G1 203 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 RSPH10BP0C881 870 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PRCPP42785 496 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 TAS2R42Q7RTR8 314 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PPHLN1Q8NEY8 458 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 AGBL1Q96MI9 1066 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PPP1R16BQ96T49 567 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PRPF18Q99633 342 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 LBHD1Q9BQE6 289 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 GJB4Q9NTQ9 266 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 TBC1D22BQ9NU19 505 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PRKAG2Q9UGJ0 569 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ARAP3Q8WWN8 1544 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 MAGI2Q86UL8 1455 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 BNIP3LO60238 219 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CYP2C19P33261 490 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 AARS2Q5JTZ9 985 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 COA7Q96BR5 231 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PLEKHA8Q96JA3 519 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CCT8L2Q96SF2 557 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 NSMCE4AQ9NXX6 385 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 FBXO40Q9UH90 709 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SMAPO00193 183 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 BBOX1O75936 387 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 KRT75O95678 551 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CDC27P30260 824 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 GUF1Q8N442 669 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 TBC1D19Q8N5T2 526 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PCYOX1LQ8NBM8 494 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ASCC2Q9H1I8 757 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CDYLQ9Y232 598 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 IGSF1Q8N6C5 1336 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 MYH15Q9Y2K3 1946 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 TRIM49BA6NDI0 452 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 AP3M2P53677 418 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF235Q14590 738 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 KHDRBS2Q5VWX1 349 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SRLQ86TD4 932 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SETD3Q86TU7 594 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SLC13A1Q9BZW2 595 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PUS7LQ9H0K6 701 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CASS4Q9NQ75 786 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PRKAB2O43741 272 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SLC9A1P19634 815 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 STXBP2Q15833 593 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 FASTKD5Q7L8L6 764 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 DDX42Q86XP3 938 aaKnown RBP eCLIP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 BEST2Q8NFU1 509 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ATL2Q8NHH9 583 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PDCD6IPQ8WUM4 868 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 NEDD4P46934 1319 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 USP17L3A6NCW0 530 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 USP17L4A6NCW7 530 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ERVV-1B6SEH8 477 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ENO1P06733 434 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CDH6P55285 790 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 USP17L1Q7RTZ2 530 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 DHX40Q8IX18 779 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 DYNLL2Q96FJ2 89 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 OLFML3Q9NRN5 406 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 BSDC1Q9NW68 430 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PRG3Q9Y2Y8 225 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ABCB11O95342 1321 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 TRPM1Q7Z4N2 1603 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms