RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 FBXW11Q9UKB1 542 aa10.45□□□□□ -0.74
NPC2-201ENST00000238633 ANGPTL2Q9UKU9 493 aa10.45□□□□□ -0.74
NPC2-201ENST00000238633 HES2Q9Y543 173 aa10.45□□□□□ -0.74
NPC2-201ENST00000238633 DOCK6Q96HP0 2047 aa10.45□□□□□ -0.74
NPC2-201ENST00000238633 PATJQ8NI35 1801 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 DMXL2Q8TDJ6 3036 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 FLNBO75369 2602 aaKnown RBP10.44□□□□□ -0.74
NPC2-201ENST00000238633 SLC27A2O14975 620 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 CCL16O15467 120 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 HRO43593 1189 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 LRP3O75074 770 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 PSMD10O75832 226 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 MLH1P40692 756 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 DNM2P50570 870 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 PFKPQ01813 784 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 DMWDQ09019 674 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 E2F4Q16254 413 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 CSRP2Q16527 193 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 USP41Q3LFD5 358 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 RTP2Q5QGT7 225 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 FUT10Q6P4F1 479 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 ZNF852Q6ZMS4 543 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 PRR23CQ6ZRP0 262 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 MTSS1LQ765P7 747 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 NPAS3Q8IXF0 933 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 CELF5Q8N6W0 485 aaKnown RBP10.44□□□□□ -0.74
NPC2-201ENST00000238633 NELL2Q99435 816 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 RIT2Q99578 217 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 LSG1Q9H089 658 aaKnown RBP10.44□□□□□ -0.74
NPC2-201ENST00000238633 ZMYND12Q9H0C1 365 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 CHRDQ9H2X0 955 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.44□□□□□ -0.74
NPC2-201ENST00000238633 RBM28Q9NW13 759 aaKnown RBP10.44□□□□□ -0.74
NPC2-201ENST00000238633 HCFC1R1Q9NWW0 138 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 CACNG4Q9UBN1 327 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 IPPQ9Y573 584 aa10.44□□□□□ -0.74
NPC2-201ENST00000238633 SMG1Q96Q15 3661 aaKnown RBP10.44□□□□□ -0.74
NPC2-201ENST00000238633 GCN1Q92616 2671 aaKnown RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 ESYT2A0FGR8 921 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 DDX11L8A8MPP1 907 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 HNRNPA1P09651 372 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPC2-201ENST00000238633 ITGA4P13612 1032 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 HOXC13P31276 330 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 SFNP31947 248 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 JAK3P52333 1124 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 NPEPPSP55786 919 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 ADCY1Q08828 1119 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 SRSF5Q13243 272 aaKnown RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 GAS6Q14393 721 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 RTN1Q16799 776 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 PFKFB3Q16875 520 aaPredicted RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 DIEXFQ68CQ4 756 aaKnown RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 PLA2G4FQ68DD2 849 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 TANGO2Q6ICL3 276 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 PRPF31Q8WWY3 499 aaKnown RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 PAAF1Q9BRP4 392 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 PHF20Q9BVI0 1012 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 COLEC11Q9BWP8 271 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 UBN1Q9NPG3 1134 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 DNMT3BQ9UBC3 853 aaKnown RBP10.43□□□□□ -0.74
NPC2-201ENST00000238633 COL4A3BPQ9Y5P4 624 aa10.43□□□□□ -0.74
NPC2-201ENST00000238633 LAMA5O15230 3695 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 NCAM2O15394 837 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 GAS7O60861 476 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 ECI2O75521 394 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 PROS1P07225 676 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 C8AP07357 584 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 SRGAP2CP0DJJ0 459 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 ADD1P35611 737 aaKnown RBP10.42□□□□□ -0.74
NPC2-201ENST00000238633 EXOSC10Q01780 885 aaKnown RBP10.42□□□□□ -0.74
NPC2-201ENST00000238633 SATB1Q01826 763 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 LAMTOR4Q0VGL1 99 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 NECTIN1Q15223 517 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 SLC5A9Q2M3M2 681 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 LRCH2Q5VUJ6 765 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 CREB3L3Q68CJ9 461 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 PRR23BQ6ZRT6 265 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 SRGAP1Q7Z6B7 1085 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 REXO1Q8N1G1 1221 aaKnown RBP10.42□□□□□ -0.74
NPC2-201ENST00000238633 LNX1Q8TBB1 728 aaPredicted RBP10.42□□□□□ -0.74
NPC2-201ENST00000238633 ING5Q8WYH8 240 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 TMEM143Q96AN5 459 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 CCDC136Q96JN2 1154 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 RXFP3Q9NSD7 469 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 ADAM28Q9UKQ2 775 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 RAB23Q9ULC3 237 aa10.42□□□□□ -0.74
NPC2-201ENST00000238633 MYH9P35579 1960 aaKnown RBP10.41□□□□□ -0.74
NPC2-201ENST00000238633 ZBTB43O43298 467 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 TSPAN1O60635 241 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 POU2F2P09086 479 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 FCARP24071 287 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 IGFBP6P24592 240 aaPredicted RBP10.41□□□□□ -0.74
NPC2-201ENST00000238633 HOXA9P31269 272 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 NRLP54845 237 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 AMHR2Q16671 573 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 PPM1LQ5SGD2 360 aa10.41□□□□□ -0.74
NPC2-201ENST00000238633 MIER3Q7Z3K6 550 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms