RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 CCDC152Q4G0S7 254 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 CPZQ66K79 652 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 FAM9BQ8IZU0 186 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 TSPYL6Q8N831 410 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 USP38Q8NB14 1042 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCL1-201ENST00000225842 TGFBRAP1Q8WUH2 860 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 LMBR1Q8WVP7 490 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 ATXN2LQ8WWM7 1075 aaKnown RBP8.29□□□□□ -1.08
CCL1-201ENST00000225842 SCARF2Q96GP6 870 aaPredicted RBP8.29□□□□□ -1.08
CCL1-201ENST00000225842 PRMT6Q96LA8 375 aaPredicted RBP8.29□□□□□ -1.08
CCL1-201ENST00000225842 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCL1-201ENST00000225842 LRRC4CQ9HCJ2 640 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 DDX20Q9UHI6 824 aaKnown RBP8.29□□□□□ -1.08
CCL1-201ENST00000225842 RCAN3Q9UKA8 241 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 INVSQ9Y283 1065 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 ANKRD36CQ5JPF3 1778 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 TAF1P21675 1872 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 KLHL33A6NCF5 533 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 MAN2B1O00754 1011 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 APAF1O14727 1248 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 CREB3O43889 395 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 KDM1AO60341 852 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 HIP1RO75146 1068 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 CEACAM5P06731 702 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 NBPF7P0C2Y1 421 aaPredicted RBP8.28□□□□□ -1.08
CCL1-201ENST00000225842 PTX3P26022 381 aaPredicted RBP8.28□□□□□ -1.08
CCL1-201ENST00000225842 PHC1P78364 1004 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 PURAQ00577 322 aaKnown RBP8.28□□□□□ -1.08
CCL1-201ENST00000225842 TEKQ02763 1124 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 SPIRE1Q08AE8 756 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 PDCD1Q15116 288 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 IL31Q6EBC2 164 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 HHIPL2Q6UWX4 724 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 EP400NLQ6ZTU2 488 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 THAP5Q7Z6K1 395 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 ANKRD23Q86SG2 305 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 NOSTRINQ8IVI9 506 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 ZNF610Q8N9Z0 462 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 PLBD2Q8NHP8 589 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 ASB2Q96Q27 587 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 SSBP4Q9BWG4 385 aaPredicted RBP8.28□□□□□ -1.08
CCL1-201ENST00000225842 ZDHHC5Q9C0B5 715 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 ZNF700Q9H0M5 742 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 TTYH1Q9H313 450 aaPredicted RBP8.28□□□□□ -1.08
CCL1-201ENST00000225842 SP110Q9HB58 689 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 SEMA3GQ9NS98 782 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 SAP30BPQ9UHR5 308 aaKnown RBP8.28□□□□□ -1.08
CCL1-201ENST00000225842 PLAGL2Q9UPG8 496 aa8.28□□□□□ -1.08
CCL1-201ENST00000225842 LAS1LQ9Y4W2 734 aaKnown RBP8.28□□□□□ -1.08
CCL1-201ENST00000225842 COL2A1P02458 1487 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 TRIM75PA6NK02 468 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 ELL2O00472 640 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 PPP1R11O60927 126 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 ASGR2P07307 311 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 TRIM27P14373 513 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 CCT4P50991 539 aaKnown RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 CLCN7P51798 805 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 NEK3P51956 506 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 KRT85P78386 507 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 PPIL2Q13356 520 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 GTF2H3Q13889 308 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 TREML4Q6UXN2 200 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 OTOP3Q7RTS5 596 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 ZNF775Q96BV0 537 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 FCRL2Q96LA5 508 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 TEKT5Q96M29 485 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 PARK7Q99497 189 aaKnown RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 ARPC5LQ9BPX5 153 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 ZMAT4Q9H898 229 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 CCM2LQ9NUG4 571 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 FAM50BQ9Y247 325 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 AOX1Q06278 1338 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 IL16Q14005 1332 aa8.27□□□□□ -1.09
CCL1-201ENST00000225842 FRMPD2Q68DX3 1309 aaPredicted RBP8.27□□□□□ -1.09
CCL1-201ENST00000225842 ZSWIM8A7E2V4 1837 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 LAMB2P55268 1798 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 C22orf46C9J442 243 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 TNPO2O14787 897 aaKnown RBP8.26□□□□□ -1.09
CCL1-201ENST00000225842 FUCA1P04066 466 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 HOXB7P09629 217 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 IFIT2P09913 472 aaKnown RBP8.26□□□□□ -1.09
CCL1-201ENST00000225842 MRPS5P82675 430 aaKnown RBP8.26□□□□□ -1.09
CCL1-201ENST00000225842 HLA-DQA1Q5Y7H0 255 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 SH3RF2Q8TEC5 729 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 ZKSCAN4Q969J2 545 aaPredicted RBP8.26□□□□□ -1.09
CCL1-201ENST00000225842 TEPSINQ96N21 525 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 AIFM3Q96NN9 605 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 WRNIP1Q96S55 665 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 LRFN3Q9BTN0 628 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 SARGQ9BW04 601 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 CD244Q9BZW8 370 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 EPB41L1Q9H4G0 881 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 ATP13A1Q9HD20 1204 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 USP25Q9UHP3 1055 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 ADGRE2Q9UHX3 823 aa8.26□□□□□ -1.09
CCL1-201ENST00000225842 COA3Q9Y2R0 106 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms