RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Tfdp1Q08639 410 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Asprv1Q09PK2 339 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 St3gal2Q11204 350 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Pgap2Q3TQR0 254 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Rbm20Q3UQS8 1199 aaKnown RBP8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Scarf1Q5ND28 820 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Cd180Q62192 661 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Lrrcc1Q69ZB0 1026 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Frmd5Q6P5H6 517 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Castor2Q8CAB8 329 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Rtn4rl1Q8K0S5 445 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Fam151aQ8QZW3 608 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Angptl2Q9R045 493 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Lhx6Q9R1R0 363 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Spg11Q3UHA3 2430 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Cntnap5aQ0V8T9 1304 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gm43738A0A0G2JEA5 862 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 4932429P05RikA2ADI4 785 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Grik3B1AS29 919 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Tbc1d2B1AVH7 922 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Dcpp2E9PYC2 171 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Dcpp1L7N1X9 171 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Actn3O88990 900 aaKnown RBP8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Lsp1P19973 330 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ptpn5P54830 541 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ccdc34Q3UI66 367 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Psg29Q3URN6 468 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Mvb12bQ6KAU4 317 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Hook2Q7TMK6 716 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Lats2Q7TSJ6 1042 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Pknox2Q8BG99 474 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Lrrc41Q8K1C9 807 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Fam161aQ8QZV6 448 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Wasf1Q8R5H6 559 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Olfr390Q8VEZ7 311 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Syt12Q920N7 421 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Slc12a9Q99MR3 914 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gins2Q9D600 185 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Lman2Q9DBH5 358 aaKnown RBP8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Clcn5Q9WVD4 746 aa8.9□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ralgapa1Q6GYP7 2035 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Fam205aA2APU8 1308 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Veph1A1A535 833 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Vmn2r121A2BE32 847 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Plcb2A3KGF7 1181 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Tatdn2B7ZNL9 783 aaKnown RBP8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Tgfbr3lD3YZZ2 297 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Tcp10bE9PYJ0 438 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Tcp10cE9Q046 482 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Got1P05201 413 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ly6aP05533 134 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gas2P11862 314 aaKnown RBP8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Hoxd8P23463 289 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Cd68P31996 326 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Pcbp1P60335 356 aaKnown RBP8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 E2f8Q58FA4 860 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Pwwp2aQ69Z61 730 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Klhl17Q6TDP3 640 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Rexo1Q7TT28 1213 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Def6Q8C2K1 630 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Kct2Q8K201 259 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Nod2Q8K3Z0 1020 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 NeproQ8R2U2 564 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Dqx1Q924H9 718 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ackr4Q924I3 350 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Cfap54Q8C6S9 3106 aa8.89□□□□□ -0.99
Trim40-203ENSMUST00000172711 Arid2E9Q7E2 1828 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Atg2aQ6P4T0 1914 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Spata31d1aE9QA35 1336 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gm4756A0A140LIS8 335 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gm3002E9PW72 216 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Mdm4O35618 489 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Tal1P22091 329 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Nek1P51954 1203 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Capn13Q3UW68 665 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Fbxw11Q5SRY7 542 aaKnown RBP8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 LpoQ5SW46 710 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Trim17Q7TPM3 477 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 CyldQ80TQ2 952 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Gpr62Q80UC6 358 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Thnsl1Q8BH55 747 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ehd2Q8BH64 543 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Fbxo9Q8BK06 437 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Vmn1r213Q8R278 384 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Washc1Q8VDD8 475 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Olfr30Q8VGD8 315 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Wrnip1Q91XU0 660 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Pip4k2cQ91XU3 421 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Pcdhgb4Q91XX6 912 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 DarsQ922B2 501 aaKnown RBP8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ophn1Q99J31 802 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Padi3Q9Z184 664 aa8.88□□□□□ -0.99
Trim40-203ENSMUST00000172711 Trbv21A0A0A6YX06 97 aa8.87□□□□□ -0.99
Trim40-203ENSMUST00000172711 Skint8A7XV07 398 aa8.87□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ppfia4B8QI36 1187 aa8.87□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ccdc152E9PX14 254 aa8.87□□□□□ -0.99
Trim40-203ENSMUST00000172711 C6E9Q6D8 931 aa8.87□□□□□ -0.99
Trim40-203ENSMUST00000172711 Akr1c19G3X9Y6 323 aa8.87□□□□□ -0.99
Trim40-203ENSMUST00000172711 Ap1b1O35643 943 aaKnown RBP8.87□□□□□ -0.99
Trim40-203ENSMUST00000172711 Fcgr2P08101 330 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms