RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Scgb2b2Q6UGQ3 114 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gcfc2Q8BKT3 769 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Zfp120Q8BZW4 436 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Thop1Q8C1A5 687 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Q8CD60 292 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rtfdc1Q99K95 307 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 LpxnQ99N69 386 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mrpl1Q99N96 336 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Golph3Q9CRA5 298 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Borcs5Q9D920 195 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Thap11Q9JJD0 305 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 C1qtnf1Q9QXP7 281 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm4297D3YWB7 211 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Zfp408H7BX78 710 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Hcn4O70507 1186 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Idi1P58044 227 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rasa2P58069 847 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ogfod1Q3U0K8 545 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cnga4Q3UW12 575 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Itih2Q61703 946 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Scube1Q6NZL8 1018 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nyap1Q6PFX7 833 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Q80WR5 230 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 DcakdQ8BHC4 231 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tbc1d17Q8BYH7 645 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Afap1l1Q8BZI0 768 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ushbp1Q8R370 680 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cabp7Q91ZM8 215 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam227bQ9D518 532 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 1700123K08RikQ9D991 295 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Dlc1Q9R0Z9 1092 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sel1lQ9Z2G6 790 aa10.34□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Marf1Q8BJ34 1730 aaKnown RBP10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 PtprvP70289 1705 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm21698A0A087WQP8 267 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm21663A0A0G2JE01 267 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm7347D3YYI9 267 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 5031410I06RikE9Q4E0 267 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Olfm1O88998 485 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lig1P37913 916 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Kcnj6P48542 425 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 N4bp1Q6A037 893 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Clec7aQ6QLQ4 244 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ddx10Q80Y44 875 aaKnown RBP10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 VcpkmtQ8C436 228 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Pgm2l1Q8CAA7 621 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ttll1Q91V51 423 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Zdhhc7Q91WU6 308 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Nuf2Q99P69 463 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Trim12aQ99PQ1 284 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mtfr1lQ9CWE0 289 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Efhd2Q9D8Y0 240 aaKnown RBP10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rwdd2aQ9D9S3 292 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cyp39a1Q9JKJ9 470 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tlr2Q9QUN7 784 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 RptorQ8K4Q0 1335 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Psme4Q5SSW2 1843 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Znf804aA2AKY4 1200 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ifi206G3UZV2 921 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sult3a1O35403 293 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 BtkP35991 659 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cul4aQ3TCH7 759 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lrrn4clQ3TYX2 239 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Map3k9Q3U1V8 1077 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Vars2Q3U2A8 1060 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gnat3Q3V3I2 354 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 AsnsQ61024 561 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sin3bQ62141 1098 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tfe3Q64092 572 aaKnown RBP10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ccdc154Q6RUT8 657 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Jade1Q6ZPI0 834 aaKnown RBP10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Enoph1Q8BGB7 257 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Armcx3Q8BHS6 379 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Smarcal1Q8BJL0 910 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lrif1Q8CDD9 755 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 CherpQ8CGZ0 936 aaKnown RBP10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ints5Q8CHT3 1018 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Klhl25Q8R2P1 589 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tbc1d22aQ8R5A6 516 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 SelenomQ8VHC3 145 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sec14l2Q99J08 403 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lactb2Q99KR3 288 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Zcchc12Q9CZA5 402 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Adck1Q9D0L4 525 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Trpm5Q9JJH7 1158 aa10.33□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ccdc163A2AGD7 326 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Armc3A2AU72 881 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ildr2B5TVM2 661 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ttc7bE9Q6P5 843 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 FxnO35943 207 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Igf2bp1O88477 577 aaKnown RBP10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tspyl1O88852 379 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 AlbP07724 608 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tgfb3P17125 410 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cdh15P33146 784 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Eci1P42125 289 aaKnown RBP10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rfx2P48379 717 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Akap14Q3V0I7 536 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rsad1Q5SUV1 442 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Nr2e1Q64104 385 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms