RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Sv2aQ9JIS5 742 aa24.67■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Ttll8A4Q9F1 832 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Hnrnph3D3Z3N4 346 aaKnown RBP24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 ErmardE9Q048 622 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Hoxc8P09025 242 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Ano9P86044 747 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 ItpripQ3TNL8 555 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Mansc4Q3UU94 337 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Suz12Q80U70 741 aaKnown RBP24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Hpcal4Q8BGZ1 191 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Pi4kbQ8BKC8 816 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Dclk3Q8BWQ5 790 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Psmd6Q99JI4 389 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Olfr456B2RT27 312 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 1700064H15RikD3Z4D4 81 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 StrnO55106 780 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Ccdc114Q3UX62 658 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Fam198aQ3UY90 562 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Mpzl3Q3V3F6 237 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Git1Q68FF6 770 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 C2cd5Q7TPS5 1016 aaKnown RBP24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 MtrrQ8C1A3 696 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Fam155aQ8CCS2 467 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Krt222Q8CCX5 294 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Fbxo43Q8CDI2 640 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Olfr458Q8VF80 313 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Olfr457Q8VGP5 313 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Q922R1 422 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Zfp64Q99KE8 643 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Fam217aQ9D9W6 419 aa24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 PfkpQ9WUA3 784 aaKnown RBP24.66■■□□□ 1.54
Upf3a-201ENSMUST00000043767 SktA2AQ25 1946 aaKnown RBP24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Gm45261A0A1B0GSP6 197 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Gm13128L7MU96 475 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Nck2O55033 380 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Rfc1P35601 1131 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Abi3bpQ59IW6 1179 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 NntQ61941 1086 aaKnown RBP24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Atp1a2Q6PIE5 1020 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Stap2Q8R0L1 411 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Tbc1d13Q8R3D1 400 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Krt86P97861 486 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Rhox12Q4TU81 186 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Pla2g4cQ64GA5 597 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 OgtQ8CGY8 1046 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Igdcc4Q9EQS9 1252 aa24.65■■□□□ 1.54
Upf3a-201ENSMUST00000043767 Gucy2dA0A0U1RPR8 1117 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Serpinc1P32261 465 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Psmb7P70195 277 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Klra9Q2TJJ8 266 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 ShbQ6PD21 503 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Tmem39aQ9CYC3 486 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Serpina9Q9D7D2 418 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Cpsf3Q9QXK7 684 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Wnt8bQ9WUD6 350 aa24.64■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Scgb2b11A0A087WR49 112 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 E030030I06RikJ3QML9 246 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Vmn2r15L7N2A0 855 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 TxkP42682 527 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Elf1Q60775 612 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ntan1Q64311 310 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Mettl25Q6NXH8 597 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 F13a1Q8BH61 732 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Olfml3Q8BK62 406 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ccdc73Q8CDM4 1066 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Kat5Q8CHK4 513 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ankrd54Q91WK7 299 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Creb3l3Q91XE9 479 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Prc1Q99K43 603 aaKnown RBP24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Cse1lQ9ERK4 971 aaKnown RBP24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Trim10Q9WUH5 489 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Wdr81Q5ND34 1934 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Zdbf2Q5SS00 2493 aaKnown RBP24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Wdr72D3YYM4 1114 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 DtnbO70585 659 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Meis3P97368 378 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Lrriq3Q14DL3 633 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 ItgaeQ60677 1167 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Acad11Q80XL6 779 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 PdxkQ8K183 312 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ca9Q8VHB5 437 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Nmrk1Q91W63 195 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Slc5a4aQ9ET37 656 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Morc1Q9WVL5 950 aa24.63■■□□□ 1.53
Upf3a-201ENSMUST00000043767 PurbO35295 324 aaKnown RBP24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Scp2P32020 547 aaKnown RBP24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ces5aQ6AW46 575 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ccdc57Q6PHN1 1016 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Nek5Q7TSC3 627 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ush1gQ80T11 461 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Snx17Q8BVL3 470 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Fam126bQ8C729 530 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Adgrg3Q8R0T6 542 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Eif4a3Q91VC3 411 aaKnown RBP24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Ces1fQ91WU0 561 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Rbm31yQ9D3U4 565 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Znf354bQ9QXT9 601 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Fkbp1bQ9Z2I2 108 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Kpna6O35345 536 aa24.62■■□□□ 1.53
Upf3a-201ENSMUST00000043767 Kcnu1O54982 1121 aa24.62■■□□□ 1.53
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms