RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Fam214aQ69ZK7 1075 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Senp5Q6NXL6 749 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PoliQ6R3M4 717 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cnot10Q8BH15 744 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Lsm14bQ8CGC4 385 aaKnown RBP12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gimap4Q99JY3 219 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Aldh18a1Q9Z110 795 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Kndc1Q0KK55 1742 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Disp2Q8CIP5 1345 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Nup62clA2AG10 272 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cyp4f40G3UW81 524 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Nptx2O70340 429 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ppp4r3cQ3V0Y1 813 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Polr2eQ80UW8 210 aaKnown RBP12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 DaglbQ91WC9 669 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ndufaf7Q9CWG8 436 aa12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 SarnpQ9D1J3 210 aaKnown RBP12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mrpl4Q9DCU6 294 aaKnown RBP12.62□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm5936A2BG95 728 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm5640A3KG49 728 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 JrklB2RRL2 523 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Olfr392Q7TRX6 312 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pih1h3bQ8C6P5 218 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Txnrd3Q99MD6 652 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 NenfQ9CQ45 171 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Efcab12V9GXH0 673 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mocs3A2BDX3 460 aaKnown RBP12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 DtnbO70585 659 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Kpna2P52293 529 aaKnown RBP12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Slc10a5Q5PT54 434 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Antxr2Q6DFX2 487 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Tcaf3Q6QR59 914 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Igsf3Q6ZQA6 1194 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Thap3Q8BJ25 218 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Usp20Q8C6M1 916 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rabgap1A2AWA9 1064 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rfx8D3YU81 596 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Spata31E9QAF0 1014 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pth1rP41593 591 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zmym1Q3TJB1 983 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pdk2Q9JK42 407 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gabbr1Q9WV18 960 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Nlrp1bA1Z198 1177 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm21962L7N280 338 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ccr1P51675 355 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Lpar1P61793 364 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Fam198aQ3UY90 562 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cyp2c29Q64458 490 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 RetsatQ64FW2 609 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rusc1Q8BG26 893 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gpc3Q8CFZ4 579 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Lrrc8cQ8R502 803 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Arih1Q9Z1K5 555 aa12.61□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zfp626A0A0U1RQ84 676 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PklrP53657 574 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Stmn2P55821 179 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm5622Q810Q0 167 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 EtnpplQ8BWU8 499 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Kct2Q8K201 259 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Znf445Q8R2V3 986 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rnf181Q9CY62 165 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Tfr2Q9JKX3 798 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Hmx1O70218 332 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gja8P28236 440 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Klra9Q2TJJ8 266 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Smcr8Q3UMB5 935 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Fhod1Q6P9Q4 1197 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 GanQ8CA72 597 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Q8CEZ4 452 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pcdha9Q91Y11 979 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mxra8Q9DBV4 442 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cdc42ep4Q9JM96 349 aaKnown RBP12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm7086A0A1W2P766 342 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Serpinh1P19324 417 aaKnown RBP12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cyp2c39P56656 490 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Tmem26Q3UP23 366 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PighQ5M9N4 188 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pabpn1lQ5XFR0 273 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Lrfn2Q80TG9 788 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ints2Q80UK8 1198 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 E330017A01RikQ8BU47 192 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Siglec1Q62230 1695 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Sh2d4bA6X942 431 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 AoahO35298 574 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 NxnP97346 435 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 rp9P97762 213 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Slc16a10Q3U9N9 512 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gucy2gQ6TL19 1100 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 SgczQ8BX51 311 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 SncbQ91ZZ3 133 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 3830403N18RikQ9D6C3 208 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Bcl9lQ67FY2 1494 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm29133A0A1B0GT72 266 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Irf8P23611 424 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Usp10P52479 792 aaKnown RBP12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 CstaP56567 97 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mylk3Q3UIZ8 795 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Tas2r134Q7TQB0 298 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Epc1Q8C9X6 813 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 TrabdQ99JY4 376 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms