RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 CenpkQ9ESN5 271 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Uhrf1bp1B2KF50 1429 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gm3187M0QWW3 260 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rab6bP61294 208 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Prr7Q3V0I2 269 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Epha7Q61772 998 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 P2ry10Q8BFU7 328 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ipo5Q8BKC5 1097 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rps6kc1Q8BLK9 1056 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Wdr60Q8C761 999 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gpc3Q8CFZ4 579 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 RnmtQ9D0L8 465 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Noxred1Q9D3S5 366 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tgm5Q9D7I9 724 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tbx18Q9EPZ6 613 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Msr1P30204 458 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ddit3P35639 168 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mark3Q03141 753 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 PRAG1Q571I4 1179 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Peg10Q7TN75 958 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Adcy2Q80TL1 1090 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gpt2Q8BGT5 522 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tlk1Q8C0V0 766 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Trex1Q91XB0 314 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ndufv1Q91YT0 464 aa10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Hspbp1Q99P31 357 aaKnown RBP10.38□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mbd5B1AYB6 1498 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Soat2O88908 525 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 AfmO89020 608 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kcnma1Q08460 1209 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pcgf5Q3UK78 256 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Spag6Q3V0U9 509 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 A430089I19RikQ8C9W1 407 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 PdxkQ8K183 312 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Paip2bQ91W45 136 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rpn1Q91YQ5 608 aaKnown RBP10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Card9A2AIV8 536 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Lrrc38A2VDH3 298 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kdm7aQ3UWM4 940 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tnni3kQ5GIG6 834 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Krt75Q8BGZ7 551 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pnma1Q8C1C8 353 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Eps8l1Q8R5F8 716 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 EtfbQ9DCW4 255 aaKnown RBP10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Dkc1Q9ESX5 509 aaKnown RBP10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ttll10A4Q9F3 704 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Zfp788E9Q980 884 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ints2Q80UK8 1198 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 N4bp3Q8C7U1 537 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 HibchQ8QZS1 385 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pcdhgb4Q91XX6 912 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rnf31Q924T7 1066 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 DtnaQ9D2N4 746 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mrpl4Q9DCU6 294 aaKnown RBP10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Serpinb6cW4VSP4 379 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Slc1a1P51906 523 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ano4Q8C5H1 955 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kbtbd4Q8R179 534 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mettl13Q91YR5 698 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Xpo6Q924Z6 1125 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ddx47Q9CWX9 455 aaKnown RBP10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 SufuQ9Z0P7 484 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rps6ka4Q9Z2B9 773 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Akr1b10G5E895 316 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 PdgfraP26618 1089 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 LtbrP50284 415 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Znf496Q5SXI5 585 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Flot2Q60634 428 aaKnown RBP10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cd180Q62192 661 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mcf2lQ64096 1149 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ces5aQ6AW46 575 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 TdrkhQ80VL1 560 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 CenpuQ8C4M7 410 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cog3Q8CI04 820 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Upb1Q8VC97 393 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gabbr1Q9WV18 960 aa10.37□□□□□ -0.75
Syne1-201ENSMUST00000041639 1700011I03RikE9PYL8 271 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 A530032D15RikE9Q422 215 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tal1P22091 329 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 GalcP54818 684 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pglyrp2Q8VCS0 530 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 PygmQ9WUB3 842 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Abca16E9PWJ7 1678 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Olfm3P63056 478 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 LxnP70202 222 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kiaa0319Q5SZV5 1081 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 FancbQ5XJY6 703 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tfe3Q64092 572 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ephx4Q6IE26 359 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Trpm8Q8R4D5 1104 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cuedc2Q9CXX9 284 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 CtsfQ9R013 462 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Olfr1354E9Q5G9 310 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 AgtP11859 477 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rcn1Q05186 325 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tmprss11aQ3UQ41 389 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mtmr10Q7TPM9 771 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Trpa1Q8BLA8 1125 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 SgczQ8BX51 311 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mrpl47Q8K2Y7 252 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms