RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 PuraP42669 321 aaKnown RBP17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Enoph1Q8BGB7 257 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Olfml3Q8BK62 406 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Thap2Q9D305 217 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Txnrd1Q9JMH6 613 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Myh2G3UW82 1942 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Myh1Q5SX40 1942 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Fam167bP17257 162 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 PtpreP49446 699 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 SnrpfP62307 86 aaKnown RBP17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Sh3gl1Q62419 368 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cdk8Q8R3L8 464 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Casp12O08736 419 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 S100a6P14069 89 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Map4k1P70218 827 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 CybbQ61093 570 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Znf507Q6ZPY5 941 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Eif2b5Q8CHW4 717 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Apoa4P06728 395 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cog3Q8CI04 820 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Srgap2Q91Z67 1071 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Drap1Q9D6N5 205 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 PdhbQ9D051 359 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slc40a1Q9JHI9 570 aa17.45■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 UrosP51163 265 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Vamp7P70280 220 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 TcimQ9D915 106 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Fam193bQ3U2K0 892 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Sh3gl2Q62420 352 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Magi3Q9EQJ9 1476 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm45261A0A1B0GSP6 197 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Morc3F7BJB9 942 aaKnown RBP17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Psmc3O88685 442 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Acot6Q32Q92 419 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gpbp1l1Q6NZP2 473 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cd248Q91V98 765 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Traf7Q922B6 594 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kdm6bQ5NCY0 1641 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tulp4Q9JIL5 1547 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Apoa1Q00623 264 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 4930504O13RikQ8C5Z9 145 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tubgcp4Q9D4F8 667 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Usp29Q9ES63 869 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Madcam1Q61826 405 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 TarsQ9D0R2 722 aaKnown RBP17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Chit1Q9D7Q1 464 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cyp39a1Q9JKJ9 470 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Atp10bB1AWN4 1474 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Myl2P51667 166 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Chn2Q80XD1 332 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pcdhb15Q91Y04 786 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tomm70Q9CZW5 611 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kif1aP33173 1695 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Asxl2Q8BZ32 1370 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Vps33bP59016 617 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tex11Q14AT2 947 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Adam1aQ60813 791 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Znf219Q6IQX8 726 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Dgcr8Q9EQM6 773 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Slc16a1P53986 493 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Fxr1Q61584 677 aaKnown RBP17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 LdhdQ7TNG8 484 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 PreplQ8C167 725 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Alas1Q8VC19 642 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ttc33Q9D6K7 262 aa17.44■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 HexdcQ3U4H6 486 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Stard7Q8R1R3 373 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Q91WD4 421 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 TnrQ8BYI9 1358 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Atp9bP98195 1146 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Mdc1Q5PSV9 1707 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tfdp2Q64163 446 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Fam102aQ78T81 392 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Plekha8Q80W71 519 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Rasgrp4Q8BTM9 673 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pcdhb7Q8CDY9 829 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Cyp3a59D3Z2W7 503 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Atp11aP98197 1187 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ccndbp1Q3TVC7 356 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pdzrn4E9PUZ9 1014 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Lire1P11260 357 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gm5622Q810Q0 167 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Gga3Q8BMI3 718 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Ube4bQ9ES00 1173 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tlr2Q9QUN7 784 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Rps6kb2Q9Z1M4 485 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 KhnynQ80U38 671 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Zfp317Q8C0Q5 607 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pphln1Q8K2H1 381 aaKnown RBP17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 FopnlQ9CZS3 174 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Odr4Q4PJX1 447 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Rbm15bQ6PHZ5 887 aaKnown RBP17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Depdc5P61460 1591 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 ErmardE9Q048 622 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Serpinb6dQ3UWK8 375 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Foxd4Q60688 444 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Tdpoz2Q717B2 364 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Pomgnt2Q8BW41 605 aa17.43■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Kiaa1107Q80TK0 1369 aa17.42■□□□□ 0.38
Ccdc88a-201ENSMUST00000040182 Akap10O88845 662 aa17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms