RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Exosc10P56960 887 aaKnown RBP12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Rpusd2Q149F1 553 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Sec31bQ3TZ89 1158 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Pdap1Q3UHX2 181 aaKnown RBP12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Map3k12Q60700 888 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Tnfaip2Q61333 691 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Mindy1Q76LS9 468 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Fgd5Q80UZ0 1219 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 UnkQ8BL48 810 aaKnown RBP12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Stx18Q8VDS8 334 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Pip4k2cQ91XU3 421 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Cd302Q9DCG2 228 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 WtapQ9ER69 396 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Rsc1a1Q9ER99 582 aa12.23□□□□□ -0.45
Trim55-201ENSMUST00000029139 Myh10Q61879 1976 aaKnown RBP12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 PfasQ5SUR0 1337 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Trim12cD3Z3L3 497 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Gm3488M0QW81 238 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Il7P10168 154 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Cdh5P55284 784 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Akap14Q3V0I7 536 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Dnajc1Q61712 552 aaKnown RBP12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Trim28Q62318 834 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 N4bp1Q6A037 893 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Phf24Q80TL4 400 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Pnma2Q8BHK0 365 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Snx14Q8BHY8 964 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Arhgap24Q8C4V1 747 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Ints9Q8K114 658 aaKnown RBP12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Pcdha12Q91Y18 950 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Fam111aQ9D2L9 613 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 NosipQ9D6T0 301 aaKnown RBP12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Tjp2Q9Z0U1 1167 aaKnown RBP12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 HephQ9Z0Z4 1157 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Fer1l6E0CZ42 1862 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Col20a1Q923P0 1320 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Btbd35f28A2CFD5 498 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Ankle1A8VU90 534 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Galntl6E5D8G1 601 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Gm7535F7CXE4 302 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Gm5145F8VQ88 278 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Btbd35f30J3QML3 498 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Cbfa2t3O54972 620 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Rasgrf1P27671 1262 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Kcnj8P97794 424 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Eif2ak2Q03963 515 aaKnown RBP12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Prickle1Q3U5C7 832 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Tcf12Q61286 706 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Fam204aQ8C6C7 236 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Nlrp4bQ8C6J9 863 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Serpinb13Q8CDC0 389 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Pop1Q8K205 1045 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Gpr108Q91WD0 569 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Dr1Q91WV0 176 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Creb3l3Q91XE9 479 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Marc2Q922Q1 338 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Tmem192Q9CXT7 266 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 MtrexQ9CZU3 1040 aaKnown RBP12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Katnal2Q9D3R6 539 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Ccdc22Q9JIG7 627 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Dpp6Q9Z218 804 aa12.22□□□□□ -0.45
Trim55-201ENSMUST00000029139 Myo5bP21271 1818 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Prrc2bQ7TPM1 1486 aaKnown RBP12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Gm29106A0A087WSP8 697 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 PparaP23204 468 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Psmc2P46471 433 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Fgfr4Q03142 799 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Fam172aQ3TNH5 417 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Gm14685Q52KH6 695 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Mef2aQ60929 498 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 TmpoQ61033 693 aaKnown RBP12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Lrig3Q6P1C6 1117 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 PimregQ8BFY7 231 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Efl1Q8C0D5 1127 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Nek11Q8C0Q4 628 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Lmbrd2Q8C561 694 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Commd10Q8JZY2 202 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Dync1li1Q8R1Q8 523 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Dennd2dQ91VV4 469 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Epn3Q91W69 636 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Ttc5Q99LG4 440 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Cdca5Q9CPY3 264 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Chmp3Q9CQ10 224 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Mrps25Q9D125 171 aaKnown RBP12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Shank3Q4ACU6 1730 aa12.21□□□□□ -0.45
Trim55-201ENSMUST00000029139 Mical3Q8CJ19 1993 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Mtcl1Q3UHU5 1945 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Gm36028A0A0U1RPM1 299 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Cyp4a32A2A8T1 509 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Cdh19E9Q3A7 770 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Gm10134F6ZQC6 126 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Ifi206G3UZV2 921 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Cyp4a14O35728 507 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Pak1O88643 545 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Eci1P42125 289 aaKnown RBP12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 VdrP48281 422 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Mcl1P97287 331 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Tmem120bQ3TA38 339 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Pex1Q5BL07 1284 aa12.21□□□□□ -0.46
Trim55-201ENSMUST00000029139 Adad1Q5SUE7 619 aa12.21□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms