RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Tbc1d22bQ80VE5 505 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Suds3Q8BR65 328 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pcdhb12Q91Y07 789 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Usp29Q9ES63 869 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Nudt5Q9JKX6 218 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Nwd2Q6P5U7 1742 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Tjp1P39447 1745 aaKnown RBP10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 6030498E09RikB1AX85 169 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Cdr1E9Q0B4 517 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Nrg3O35181 713 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Klc1O88447 541 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 UrosP51163 265 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pkn1P70268 946 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Vamp7P70280 220 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 NfibP97863 570 aaKnown RBP10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pou6f1Q07916 301 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Agxt2Q3UEG6 513 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Dzip3Q7TPV2 1204 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ttc7aQ8BGB2 858 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pex19Q8VCI5 299 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Itgb1bp2Q9R000 350 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 EmcnQ9R0H2 261 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Lrrc63A6H694 637 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 JrklB2RRL2 523 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 4930544D05RikJ3QK56 214 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pja1O55176 578 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Serpina1aP07758 413 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Klra1P20937 262 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Serpina1cQ00896 412 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Serpina1dQ00897 413 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 D630036H23RikQ3UQD6 204 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Brd9Q3UQU0 596 aaKnown RBP10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Serpinb6Q60854 378 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Lonp1Q8CGK3 949 aaKnown RBP10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 GrapQ9CX99 217 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Tgm5Q9D7I9 724 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Styxl1Q9DAR2 321 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Rilpl1Q9JJC6 406 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Psmg1Q9JK23 289 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ifi202Q9R002 445 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Vav3Q9R0C8 847 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 RpgrQ9R0X5 1001 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Tll2Q9WVM6 1012 aa10.07□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Fam205aA2APU8 1308 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Usp17ldG5E8G2 545 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Usp17lcG5E8I7 545 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pik3r1P26450 724 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 PhbP67778 272 aaKnown RBP10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Smad1P70340 465 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Sox10Q04888 466 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Rcn1Q05186 325 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Trmt1Q3TX08 663 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Atp13a5Q3TYU2 1216 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Sema5aQ62217 1077 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Rhot1Q8BG51 631 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Arhgap24Q8C4V1 747 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Wdr27Q8C5V5 780 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Pdxdc1Q99K01 787 aaKnown RBP10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 CtsfQ9R013 462 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Lama4P97927 1816 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Itpripl1A2ASA8 547 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Arhgap42B2RQE8 841 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ttc17E9PVB5 1198 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Scarf1Q5ND28 820 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Fam204aQ8C6C7 236 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 NemfQ8CCP0 1064 aaKnown RBP10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ccdc80Q8R2G6 949 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Akr1c14Q91WT7 323 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Polr3fQ921X6 316 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Fgfr1op2Q9CRA9 253 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Bcl9lQ67FY2 1494 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Gm11985A0A1B0GS61 206 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Mageb2A2AHM0 380 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Mocs3A2BDX3 460 aaKnown RBP10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ccnyl1D3YUJ3 367 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 DgkhD3YXJ0 1156 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Nptx2O70340 429 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Marcksl1P28667 200 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Hoxa11P31311 313 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 InhbaQ04998 424 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Caprin2Q05A80 1031 aaKnown RBP10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Ptger2Q62053 362 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Kbtbd3Q8BHI4 607 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Wrap53Q8VC51 532 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Dtnbp1Q91WZ8 352 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Senp2Q91ZX6 588 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Igf2bp3Q9CPN8 579 aaKnown RBP10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Gadd45gQ9Z111 159 aa10.06□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Unc13bQ9Z1N9 1602 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Gm13084A2A8N0 494 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Zfp839E9PUU5 921 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Cdk14O35495 469 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 EporP14753 507 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Rgs9bpQ148R9 237 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 R3hdm4Q4VBF2 262 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Slc7a14Q8BXR1 771 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Olfr390Q8VEZ7 311 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Dnajc3Q91YW3 504 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Gmcl1Q920G9 524 aa10.05□□□□□ -0.8
Col6a1-201ENSMUST00000001147 Mrps22Q9CXW2 359 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms