RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 PPH21P23594 369 aa-0.2□□□□□ -2.44
snR49snR49 MNE1P24720 663 aa-0.2□□□□□ -2.44
snR49snR49 ZRT1P32804 376 aa-0.2□□□□□ -2.44
snR49snR49 SIF2P38262 535 aa-0.2□□□□□ -2.44
snR49snR49 GDT1P38301 280 aaPredicted RBP-0.2□□□□□ -2.44
snR49snR49 MRPS8Q03799 155 aa-0.2□□□□□ -2.44
snR49snR49 SMT3Q12306 101 aaKnown RBP-0.2□□□□□ -2.44
snR49snR49 PAR32Q12515 295 aaKnown RBP-0.2□□□□□ -2.44
snR49snR49 CYR1P08678 2026 aaKnown RBP-0.21□□□□□ -2.44
snR49snR49 STE3P06783 470 aa-0.21□□□□□ -2.44
snR49snR49 DDI2P0CH63 225 aa-0.21□□□□□ -2.44
snR49snR49 DDI3P0CH64 225 aa-0.21□□□□□ -2.44
snR49snR49 YHR022CP38763 256 aa-0.21□□□□□ -2.44
snR49snR49 YHI9P38765 294 aa-0.21□□□□□ -2.44
snR49snR49 DOG1P38774 246 aa-0.21□□□□□ -2.44
snR49snR49 RPA34P47006 233 aaPredicted RBP-0.21□□□□□ -2.44
snR49snR49 SUB1P54000 292 aaKnown RBP-0.21□□□□□ -2.44
snR49snR49 TAZ1Q06510 381 aa-0.21□□□□□ -2.44
snR49snR49 PRP8P33334 2413 aaKnown RBP-0.21□□□□□ -2.44
snR49snR49 YML6P51998 286 aa-0.22□□□□□ -2.44
snR49snR49 FMP41P53889 259 aaKnown RBP-0.22□□□□□ -2.44
snR49snR49 VPS9P54787 451 aa-0.22□□□□□ -2.44
snR49snR49 RNP1P32385 249 aa-0.23□□□□□ -2.45
snR49snR49 ERG25P53045 309 aa-0.23□□□□□ -2.45
snR49snR49 SWC4P53201 476 aa-0.23□□□□□ -2.45
snR49snR49 YGR168CP53293 376 aa-0.23□□□□□ -2.45
snR49snR49 OKP1P53298 406 aa-0.23□□□□□ -2.45
snR49snR49 BUD25P85052 153 aa-0.23□□□□□ -2.45
snR49snR49 PEX10Q05568 337 aa-0.23□□□□□ -2.45
snR49snR49 YDR262WQ12331 272 aa-0.23□□□□□ -2.45
snR49snR49 RPS3P05750 240 aaKnown RBP-0.24□□□□□ -2.45
snR49snR49 RAD3P06839 778 aa-0.24□□□□□ -2.45
snR49snR49 COS2P0CX12 379 aa-0.24□□□□□ -2.45
snR49snR49 COS3P0CX13 379 aa-0.24□□□□□ -2.45
snR49snR49 HMT1P38074 348 aa-0.24□□□□□ -2.45
snR49snR49 PHO88P38264 188 aaPredicted RBP-0.24□□□□□ -2.45
snR49snR49 GDI1P39958 451 aaKnown RBP-0.24□□□□□ -2.45
snR49snR49 GDS1P41913 522 aa-0.24□□□□□ -2.45
snR49snR49 NIF3P53081 288 aa-0.24□□□□□ -2.45
snR49snR49 YNL146WP53906 100 aa-0.24□□□□□ -2.45
snR49snR49 RSM10Q03201 203 aa-0.24□□□□□ -2.45
snR49snR49 YML018CQ03730 393 aa-0.24□□□□□ -2.45
snR49snR49 MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.24□□□□□ -2.45not detected
snR49snR49 FKS1P38631 1876 aaKnown RBP-0.24□□□□□ -2.45
snR49snR49 TEM1P38987 245 aa-0.25□□□□□ -2.45
snR49snR49 SMD3P43321 101 aaKnown RBP-0.25□□□□□ -2.45
snR49snR49 DPP1Q05521 289 aa-0.25□□□□□ -2.45
snR49snR49 YOR114WQ12219 294 aa-0.25□□□□□ -2.45
snR49snR49 ATO3Q12359 275 aa-0.25□□□□□ -2.45
snR49snR49 RPL31AP0C2H8 113 aaKnown RBP-0.26□□□□□ -2.45
snR49snR49 NSP1P14907 823 aaKnown RBP-0.26□□□□□ -2.45
snR49snR49 YKL162CP36052 402 aa-0.26□□□□□ -2.45
snR49snR49 INA22P40576 216 aa-0.26□□□□□ -2.45
snR49snR49 YJL028WP47062 111 aa-0.26□□□□□ -2.45
snR49snR49 YNR062CP53748 327 aa-0.26□□□□□ -2.45
snR49snR49 YPR1Q12458 312 aa-0.26□□□□□ -2.45
snR49snR49 YPR064WQ12492 139 aa-0.26□□□□□ -2.45
snR49snR49 FLO9P39712 1322 aa-0.27□□□□□ -2.45
snR49snR49 RPL18AP0CX49 186 aaKnown RBP-0.27□□□□□ -2.45
snR49snR49 RPL18BP0CX50 186 aaKnown RBP-0.27□□□□□ -2.45
snR49snR49 GPA2P10823 449 aa-0.27□□□□□ -2.45
snR49snR49 SWI3P32591 825 aa-0.27□□□□□ -2.45
snR49snR49 VMA8P32610 256 aaKnown RBP-0.27□□□□□ -2.45
snR49snR49 MAL32P38158 584 aa-0.27□□□□□ -2.45
snR49snR49 AGX1P43567 385 aa-0.27□□□□□ -2.45
snR49snR49 MAL12P53341 584 aa-0.27□□□□□ -2.45
snR49snR49 MPA43P53583 542 aaPredicted RBP-0.27□□□□□ -2.45
snR49snR49 LOA1Q06508 300 aa-0.27□□□□□ -2.45
snR49snR49 RRP42Q12277 265 aaPredicted RBP-0.27□□□□□ -2.45
snR49snR49 PST1Q12355 444 aa-0.27□□□□□ -2.45
snR49snR49 IZH4Q99393 312 aa-0.27□□□□□ -2.45
snR49snR49 MDH3P32419 343 aaKnown RBP RIP-Chip data-0.28□□□□□ -2.45not detected
snR49snR49 RPS0AP32905 252 aaKnown RBP-0.28□□□□□ -2.45
snR49snR49 ADH5P38113 351 aaKnown RBP-0.28□□□□□ -2.45
snR49snR49 OST2P46964 130 aa-0.28□□□□□ -2.45
snR49snR49 SXM1Q04175 944 aaKnown RBP-0.28□□□□□ -2.45
snR49snR49 PBP4Q07362 185 aaKnown RBP-0.28□□□□□ -2.45
snR49snR49 YHR032W-AP0C5N6 59 aa-0.29□□□□□ -2.46
snR49snR49 SUA5P32579 426 aa-0.29□□□□□ -2.46
snR49snR49 RXT2P38255 430 aa-0.29□□□□□ -2.46
snR49snR49 MPP10P47083 593 aaKnown RBP-0.29□□□□□ -2.46
snR49snR49 YJR079WP47126 109 aa-0.29□□□□□ -2.46
snR49snR49 YMR007WQ03675 126 aa-0.29□□□□□ -2.46
snR49snR49 BOP2Q06150 570 aa-0.29□□□□□ -2.46
snR49snR49 YMR316C-AI2HB70 103 aa-0.3□□□□□ -2.46
snR49snR49 DAD2P36162 133 aa-0.3□□□□□ -2.46
snR49snR49 LRP1P38801 184 aaKnown RBP-0.3□□□□□ -2.46
snR49snR49 YEL067CP39978 195 aa-0.3□□□□□ -2.46
snR49snR49 ICE2P40499 491 aa-0.3□□□□□ -2.46
snR49snR49 ERV29P53337 310 aa-0.3□□□□□ -2.46
snR49snR49 UBC7Q02159 165 aa-0.3□□□□□ -2.46
snR49snR49 SDC1Q03323 175 aa-0.3□□□□□ -2.46
snR49snR49 SML1Q04964 104 aa-0.3□□□□□ -2.46
snR49snR49 PET494P07390 489 aaPredicted RBP-0.31□□□□□ -2.46
snR49snR49 QCR8P08525 94 aa-0.31□□□□□ -2.46
snR49snR49 ECM13P38195 257 aa-0.31□□□□□ -2.46
snR49snR49 SEC28P40509 296 aaKnown RBP-0.31□□□□□ -2.46
snR49snR49 VPS60Q03390 229 aa-0.31□□□□□ -2.46
snR49snR49 YMR209CQ03648 457 aa-0.31□□□□□ -2.46
snR49snR49 EMI1Q04406 187 aa-0.31□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms