RNA–Protein interactions for RNA: YPL234C

VMA11, Transcript of Vacuolar ATPase V0 domain subunit c', yeast

Gene VMA11, Length 495 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	YPL234C	CDC39	P25655	2108 aa	Known RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	BLM10	P43583	2143 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	AAC1	P04710	309 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	PHO2	P07269	559 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	CHO1	P08456	276 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	PRB1	P09232	635 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	MATALPHA1	P0CY06	175 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	HMLALPHA1	P0CY07	175 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	ARF1	P11076	181 aa	Known RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	STP22	P25604	385 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	YCR061W	P25639	631 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	EMP70	P32802	667 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	YNL208W	P40159	199 aa	Known RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	OTU1	P43558	301 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	YJR115W	P47152	169 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	GTF1	P53260	183 aa	Predicted RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	SCW4	P53334	386 aa	Known RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	APM1	Q00776	475 aa	Predicted RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	TIM44	Q01852	431 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	SNX41	Q04053	625 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	BNA7	Q04066	261 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	IRC19	Q07843	230 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	BSC6	Q08280	497 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	REX3	Q12090	404 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	RTK1	Q12100	620 aa	Predicted RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	PRP46	Q12417	451 aa	Predicted RBP	7.73	□□□□□ -1.17
VMA11	YPL234C	ODC2	Q99297	307 aa		7.73	□□□□□ -1.17
VMA11	YPL234C	FUR4	P05316	633 aa	Known RBP	7.72	□□□□□ -1.17
VMA11	YPL234C	CUP1-1	P0CX80	61 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	CUP1-2	P0CX81	61 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	STE18	P18852	110 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	KRR1	P25586	316 aa	Predicted RBP	7.72	□□□□□ -1.17
VMA11	YPL234C	ARO9	P38840	513 aa	Predicted RBP	7.72	□□□□□ -1.17
VMA11	YPL234C	CHS7	P38843	316 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	YPS6	P40583	537 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	YFR054C	P43622	192 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	CIN2	P46670	268 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	GPI14	P47088	403 aa	Known RBP	7.72	□□□□□ -1.17
VMA11	YPL234C	SCY1	P53009	804 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	SLI1	P53304	468 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	YMR210W	Q03649	449 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	YOR343C	Q12484	108 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	YOS9	Q99220	542 aa		7.72	□□□□□ -1.17
VMA11	YPL234C	MSW1	P04803	379 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	RPP1A	P05318	106 aa	Predicted RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	OPI3	P05375	206 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	CYT1	P07143	309 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	PUT1	P09368	476 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	RPL1A	P0CX43	217 aa	Known RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	RPL1B	P0CX44	217 aa	Known RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	GLK1	P17709	500 aa	Known RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	AIM17	P23180	465 aa	Known RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	ADH7	P25377	361 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	PPA2	P28239	310 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	CAM1	P29547	415 aa	Known RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	SNC2	P33328	115 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	PAN3	P36102	679 aa	Predicted RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	SSH1	P38353	490 aa	Known RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	DLS1	P40366	167 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	YIL060W	P40519	144 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	CFD1	P40558	293 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	SPG5	P42933	373 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	GNP1	P48813	663 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	LYS5	P50113	272 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	BUD25	P85052	153 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.18	not detected
VMA11	YPL234C	PET191	Q02772	108 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	TPP1	Q03796	238 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	SEI1	Q06058	285 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	YOL036W	Q08206	761 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	TFB5	Q3E7C1	72 aa	Predicted RBP	7.71	□□□□□ -1.18
VMA11	YPL234C	TAD3	Q9URQ3	322 aa		7.71	□□□□□ -1.18
VMA11	YPL234C	URA6	P15700	204 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	HXT2	P23585	541 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	YCR006C	P25350	157 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	NFS1	P25374	497 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	FAA1	P30624	700 aa	Known RBP	7.7	□□□□□ -1.18
VMA11	YPL234C	HSP150	P32478	413 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	SUA5	P32579	426 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	MKS1	P34072	584 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	OSH7	P38755	437 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	BMT5	P40493	336 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	SNO3	P43544	222 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	BXI1	P48558	297 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	PHB2	P50085	310 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	YIP4	P53093	235 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	RMD9	P53140	646 aa	Known RBP	7.7	□□□□□ -1.18
VMA11	YPL234C	CUZ1	P53899	274 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	SAM50	P53969	484 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	RVB1	Q03940	463 aa	Known RBP	7.7	□□□□□ -1.18
VMA11	YPL234C	NNT1	Q05874	261 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	HEM25	Q07534	307 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	PIN2	Q12057	282 aa		7.7	□□□□□ -1.18
VMA11	YPL234C	SNF5	P18480	905 aa		7.69	□□□□□ -1.18
VMA11	YPL234C	MEK1	P24719	497 aa	Predicted RBP	7.69	□□□□□ -1.18
VMA11	YPL234C	MKK2	P32491	506 aa		7.69	□□□□□ -1.18
VMA11	YPL234C	SEF1	P34228	1148 aa		7.69	□□□□□ -1.18
VMA11	YPL234C	MRPL27	P36526	146 aa	Predicted RBP	7.69	□□□□□ -1.18
VMA11	YPL234C	ALG3	P38179	458 aa		7.69	□□□□□ -1.18
VMA11	YPL234C	COS8	P38723	381 aa		7.69	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms