RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	POL30	P15873	258 aa	Known RBP	4.05	□□□□□ -1.76
YDC1	YPL087W	CPR2	P23285	205 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	NTG1	P31378	399 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	SSO1	P32867	290 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	SPO23	P33757	523 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	SRL3	P36167	246 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	IML3	P38265	245 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	SOP4	P39543	234 aa	Predicted RBP	4.05	□□□□□ -1.76
YDC1	YPL087W	GIM4	P40005	111 aa	Known RBP	4.05	□□□□□ -1.76
YDC1	YPL087W	AVT6	P40074	448 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	YGR201C	P42936	225 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	SFH5	P47008	294 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	BIR1	P47134	954 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	RHO5	P53879	331 aa	Known RBP	4.05	□□□□□ -1.76
YDC1	YPL087W	OAZ1	Q02803	292 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	APC4	Q04601	652 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	YPR011C	Q12251	326 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	SNF8	Q12483	233 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	MHT1	Q12525	324 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	YKL018C-A	Q3E7A7	99 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	ISN1	Q99312	450 aa		4.05	□□□□□ -1.76
YDC1	YPL087W	YPR096C	O13587	100 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	YKR104W	P0CE69	306 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	UNG1	P12887	359 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	TFS1	P14306	219 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	GCN3	P14741	305 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	IDP1	P21954	428 aa	Known RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	SLM5	P25345	492 aa	Known RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	BUD23	P25627	275 aa	Predicted RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	ITR2	P30606	609 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	PUP2	P32379	260 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	CAT2	P32796	670 aa	Known RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	RIB7	P33312	244 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	MRPL4	P36517	319 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	RRP4	P38792	359 aa	Known RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	YHR127W	P38833	243 aa	Known RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	SPO73	P40031	143 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	RTT105	P40063	208 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	PRE5	P40302	234 aa	Known RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	YGR168C	P53293	376 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	VAC7	P53950	1165 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	MET31	Q03081	177 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	SPO77	Q06134	477 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	IRC25	Q07951	179 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	SMF3	Q12078	473 aa	Predicted RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	AEP3	Q12089	606 aa		4.04	□□□□□ -1.76
YDC1	YPL087W	TPT1	Q12272	230 aa	Known RBP	4.04	□□□□□ -1.76
YDC1	YPL087W	TRP1	P00912	224 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	RPL6B	P05739	176 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	ILV5	P06168	395 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	RPS14A	P06367	137 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	STE7	P06784	515 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	DST1	P07273	309 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	NOP1	P15646	327 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	RPS1B	P23248	255 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	POP5	P28005	173 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	SEC17	P32602	292 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	ATP3	P38077	311 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	INM1	P38710	295 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	ARN2	P38724	620 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	YPT35	P38815	214 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	RPS14B	P39516	138 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	RCY1	P39531	840 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	FCY21	P40039	528 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	OSW5	P40219	148 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	STB1	P42845	420 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	PMT4	P46971	762 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	TIS11	P47977	285 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	IGO1	P53897	168 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	YMR099C	Q03161	297 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	TRM82	Q03774	444 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	EMI1	Q04406	187 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	MGR3	Q04472	501 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	YOL131W	Q08270	108 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	SRL2	Q12020	392 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	PER33	Q12144	273 aa		4.03	□□□□□ -1.76
YDC1	YPL087W	YPL245W	Q12179	454 aa	Known RBP	4.03	□□□□□ -1.76
YDC1	YPL087W	ATG7	P38862	630 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	ZIM17	P42844	174 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	EFM3	P47163	339 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	PAC10	P48363	199 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	PHB2	P50085	310 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	PRM8	P53174	237 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	MTM1	P53320	366 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	MTQ1	P53944	314 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	GPI17	Q04080	534 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	PEX10	Q05568	337 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	YLR446W	Q06204	433 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	ARR1	Q06596	294 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	MRPL35	Q06678	367 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	PST2	Q12335	198 aa	Known RBP	4.02	□□□□□ -1.77
YDC1	YPL087W	MRX4	Q12467	430 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	DCP1	Q12517	231 aa	Predicted RBP	4.02	□□□□□ -1.77
YDC1	YPL087W	YPL119C-A	Q3E751	87 aa		4.02	□□□□□ -1.77
YDC1	YPL087W	PRP8	P33334	2413 aa	Known RBP	4.01	□□□□□ -1.77
YDC1	YPL087W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
YDC1	YPL087W	FPR1	P20081	114 aa	Known RBP	4.01	□□□□□ -1.77
YDC1	YPL087W	GIT1	P25346	518 aa		4.01	□□□□□ -1.77
YDC1	YPL087W	MEI5	P32489	222 aa		4.01	□□□□□ -1.77
YDC1	YPL087W	GGC1	P38988	300 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms