RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A RPL2BP0CX46 254 aaKnown RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A VMA2P16140 517 aaKnown RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A AEP1P32493 518 aa0.05□□□□□ -2.4
YMR172C-AYMR172C-A GDH2P33327 1092 aaKnown RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A KDX1P36005 433 aa0.05□□□□□ -2.4
YMR172C-AYMR172C-A SHQ1P40486 507 aaPredicted RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A SEC28P40509 296 aaKnown RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A SUB1P54000 292 aaKnown RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A RIO1Q12196 484 aaKnown RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A SMT3Q12306 101 aaKnown RBP0.05□□□□□ -2.4
YMR172C-AYMR172C-A YDR262WQ12331 272 aa0.05□□□□□ -2.4
YMR172C-AYMR172C-A GEP5Q12393 293 aa0.05□□□□□ -2.4
YMR172C-AYMR172C-A MAL32P38158 584 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A NIF3P53081 288 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A OKP1P53298 406 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A MAL12P53341 584 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A CYT2Q00873 224 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A YML018CQ03730 393 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A PST1Q12355 444 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A NBL1Q3E7Y6 73 aa0.04□□□□□ -2.4
YMR172C-AYMR172C-A YMR316C-AI2HB70 103 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A DAD2P36162 133 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A TCD1P38756 429 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A TEM1P38987 245 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A AVT2P39981 480 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A RPL13BP40212 199 aaKnown RBP0.03□□□□□ -2.4
YMR172C-AYMR172C-A YPT32P51996 222 aaKnown RBP0.03□□□□□ -2.4
YMR172C-AYMR172C-A YMR209CQ03648 457 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A AIM36Q03798 255 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A DPP1Q05521 289 aa0.03□□□□□ -2.4
YMR172C-AYMR172C-A RPL13AQ12690 199 aaPredicted RBP0.03□□□□□ -2.4
YMR172C-AYMR172C-A DSF1P0CX08 502 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A YNR073CP0CX09 502 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A PPH21P23594 369 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A INA22P40576 216 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A MDM34P53083 459 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A BUD25P85052 153 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A MRPS8Q03799 155 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A TAZ1Q06510 381 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A PBP4Q07362 185 aaKnown RBP0.02□□□□□ -2.41
YMR172C-AYMR172C-A MEU1Q07938 337 aaKnown RBP RIP-Chip data0.02□□□□□ -2.41not detected
YMR172C-AYMR172C-A SAM4Q08985 325 aaKnown RBP0.02□□□□□ -2.41
YMR172C-AYMR172C-A ATO3Q12359 275 aa0.02□□□□□ -2.41
YMR172C-AYMR172C-A CYR1P08678 2026 aaKnown RBP0.01□□□□□ -2.41
YMR172C-AYMR172C-A RPS3P05750 240 aaKnown RBP0.01□□□□□ -2.41
YMR172C-AYMR172C-A RPL31AP0C2H8 113 aaKnown RBP0.01□□□□□ -2.41
YMR172C-AYMR172C-A CAM1P29547 415 aaKnown RBP0.01□□□□□ -2.41
YMR172C-AYMR172C-A SUA5P32579 426 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A SWI3P32591 825 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A RPS0AP32905 252 aaKnown RBP0.01□□□□□ -2.41
YMR172C-AYMR172C-A RXT2P38255 430 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A YHR022CP38763 256 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A GDS1P41913 522 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A ERV29P53337 310 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A EOS1P53938 366 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A SLD7Q08457 257 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A YOR114WQ12219 294 aa0.01□□□□□ -2.41
YMR172C-AYMR172C-A CPA1P07258 411 aaKnown RBP0□□□□□ -2.41
YMR172C-AYMR172C-A RPL18AP0CX49 186 aaKnown RBP0□□□□□ -2.41
YMR172C-AYMR172C-A RPL18BP0CX50 186 aaKnown RBP0□□□□□ -2.41
YMR172C-AYMR172C-A POX1P13711 748 aa0□□□□□ -2.41
YMR172C-AYMR172C-A HMT1P38074 348 aa0□□□□□ -2.41
YMR172C-AYMR172C-A PHO88P38264 188 aaPredicted RBP0□□□□□ -2.41
YMR172C-AYMR172C-A LRP1P38801 184 aaKnown RBP0□□□□□ -2.41
YMR172C-AYMR172C-A YJL028WP47062 111 aa0□□□□□ -2.41
YMR172C-AYMR172C-A FMP41P53889 259 aaKnown RBP0□□□□□ -2.41
YMR172C-AYMR172C-A BOP2Q06150 570 aa0□□□□□ -2.41
YMR172C-AYMR172C-A YLR162WQ06235 118 aa0□□□□□ -2.41
YMR172C-AYMR172C-A FLO9P39712 1322 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A MDH3P32419 343 aaKnown RBP RIP-Chip data-0.01□□□□□ -2.41not detected
YMR172C-AYMR172C-A ADH5P38113 351 aaKnown RBP-0.01□□□□□ -2.41
YMR172C-AYMR172C-A SIF2P38262 535 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A DOG1P38774 246 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A YIA6P40556 373 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A AGX1P43567 385 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A OST2P46964 130 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A ASI3P53983 676 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A VPS60Q03390 229 aa-0.01□□□□□ -2.41
YMR172C-AYMR172C-A RNR2P09938 399 aaKnown RBP-0.02□□□□□ -2.41
YMR172C-AYMR172C-A MSS116P15424 664 aaKnown RBP-0.02□□□□□ -2.41
YMR172C-AYMR172C-A UPS2P35200 230 aa-0.02□□□□□ -2.41
YMR172C-AYMR172C-A YKL162CP36052 402 aa-0.02□□□□□ -2.41
YMR172C-AYMR172C-A NPT1P39683 429 aaKnown RBP-0.02□□□□□ -2.41
YMR172C-AYMR172C-A YMR007WQ03675 126 aa-0.02□□□□□ -2.41
YMR172C-AYMR172C-A APC9Q12107 265 aa-0.02□□□□□ -2.41
YMR172C-AYMR172C-A YHR032W-AP0C5N6 59 aa-0.03□□□□□ -2.41
YMR172C-AYMR172C-A DDI2P0CH63 225 aa-0.03□□□□□ -2.41
YMR172C-AYMR172C-A DDI3P0CH64 225 aa-0.03□□□□□ -2.41
YMR172C-AYMR172C-A GPA2P10823 449 aa-0.03□□□□□ -2.41
YMR172C-AYMR172C-A SPT4P32914 102 aaPredicted RBP-0.03□□□□□ -2.41
YMR172C-AYMR172C-A SWD2P36104 329 aaPredicted RBP-0.03□□□□□ -2.41
YMR172C-AYMR172C-A UIP5P36137 443 aa-0.03□□□□□ -2.41
YMR172C-AYMR172C-A MPP10P47083 593 aaKnown RBP-0.03□□□□□ -2.41
YMR172C-AYMR172C-A CUE3P53137 624 aaKnown RBP-0.03□□□□□ -2.41
YMR172C-AYMR172C-A TAF9Q05027 157 aa-0.03□□□□□ -2.41
YMR172C-AYMR172C-A SKS1Q12505 502 aa-0.03□□□□□ -2.41
YMR172C-AYMR172C-A TAL1P15019 335 aaKnown RBP-0.04□□□□□ -2.42
YMR172C-AYMR172C-A YKL063CP35725 167 aa-0.04□□□□□ -2.42
YMR172C-AYMR172C-A ERV15P38312 142 aa-0.04□□□□□ -2.42
YMR172C-AYMR172C-A YJR079WP47126 109 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms