RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C RPS0AP32905 252 aaKnown RBP1.44□□□□□ -2.18
UBX4YMR067C END3P39013 349 aa1.44□□□□□ -2.18
UBX4YMR067C TIF34P40217 347 aaKnown RBP1.44□□□□□ -2.18
UBX4YMR067C GTO1P48239 356 aa1.44□□□□□ -2.18
UBX4YMR067C YPL039WQ03080 316 aa1.44□□□□□ -2.18
UBX4YMR067C MGR3Q04472 501 aa1.44□□□□□ -2.18
UBX4YMR067C YBL112CQ3E7Y4 105 aa1.44□□□□□ -2.18
UBX4YMR067C RAD10P06838 210 aa1.43□□□□□ -2.18
UBX4YMR067C CAR2P07991 424 aaKnown RBP1.43□□□□□ -2.18
UBX4YMR067C CSG2P35206 410 aa1.43□□□□□ -2.18
UBX4YMR067C YIA6P40556 373 aa1.43□□□□□ -2.18
UBX4YMR067C VPS20Q04272 221 aa1.43□□□□□ -2.18
UBX4YMR067C YMR114CQ04471 368 aaKnown RBP1.43□□□□□ -2.18
UBX4YMR067C TAF9Q05027 157 aa1.43□□□□□ -2.18
UBX4YMR067C YOL019WQ08157 551 aa1.43□□□□□ -2.18
UBX4YMR067C RAD3P06839 778 aa1.42□□□□□ -2.18
UBX4YMR067C SPT4P32914 102 aaPredicted RBP1.42□□□□□ -2.18
UBX4YMR067C SFC1P33303 322 aa1.42□□□□□ -2.18
UBX4YMR067C RIB4P50861 169 aaPredicted RBP1.42□□□□□ -2.18
UBX4YMR067C VPS60Q03390 229 aa1.42□□□□□ -2.18
UBX4YMR067C YMR316C-AI2HB70 103 aa1.41□□□□□ -2.18
UBX4YMR067C PET494P07390 489 aaPredicted RBP1.41□□□□□ -2.18
UBX4YMR067C SAR1P20606 190 aaKnown RBP1.41□□□□□ -2.18
UBX4YMR067C CAM1P29547 415 aaKnown RBP1.41□□□□□ -2.18
UBX4YMR067C ARN2P38724 620 aa1.41□□□□□ -2.18
UBX4YMR067C YJL118WP47022 219 aa1.41□□□□□ -2.18
UBX4YMR067C ASR1Q06834 288 aa1.41□□□□□ -2.18
UBX4YMR067C BOL1Q3E793 110 aa1.41□□□□□ -2.18
UBX4YMR067C PPH21P23594 369 aa1.4□□□□□ -2.19
UBX4YMR067C DPB2P24482 689 aaPredicted RBP1.4□□□□□ -2.19
UBX4YMR067C YCR102CP25608 368 aa1.4□□□□□ -2.19
UBX4YMR067C SCM4P32564 187 aa1.4□□□□□ -2.19
UBX4YMR067C HMT1P38074 348 aa1.4□□□□□ -2.19
UBX4YMR067C TDA11P38854 504 aa1.4□□□□□ -2.19
UBX4YMR067C TEM1P38987 245 aa1.4□□□□□ -2.19
UBX4YMR067C GON7P46984 123 aa1.4□□□□□ -2.19
UBX4YMR067C IBA57P47158 497 aa1.4□□□□□ -2.19
UBX4YMR067C VOA1P53262 265 aa1.4□□□□□ -2.19
UBX4YMR067C DBP6P53734 629 aaKnown RBP1.4□□□□□ -2.19
UBX4YMR067C SDC1Q03323 175 aa1.4□□□□□ -2.19
UBX4YMR067C PEX3P28795 441 aa1.39□□□□□ -2.19
UBX4YMR067C GDH2P33327 1092 aaKnown RBP1.39□□□□□ -2.19
UBX4YMR067C KEL2P50090 882 aa1.39□□□□□ -2.19
UBX4YMR067C FMP41P53889 259 aaKnown RBP1.39□□□□□ -2.19
UBX4YMR067C PEX12Q04370 399 aa1.39□□□□□ -2.19
UBX4YMR067C YMR111CQ04461 462 aaPredicted RBP1.39□□□□□ -2.19
UBX4YMR067C RRG8Q06109 277 aa1.39□□□□□ -2.19
UBX4YMR067C YPL247CQ12523 523 aa1.39□□□□□ -2.19
UBX4YMR067C YAL064W-BO13512 126 aa1.38□□□□□ -2.19
UBX4YMR067C PUT1P09368 476 aa1.38□□□□□ -2.19
UBX4YMR067C VMA2P16140 517 aaKnown RBP1.38□□□□□ -2.19
UBX4YMR067C SWI3P32591 825 aa1.38□□□□□ -2.19
UBX4YMR067C YDR089WP38966 869 aa1.38□□□□□ -2.19
UBX4YMR067C AGP3P43548 558 aa1.38□□□□□ -2.19
UBX4YMR067C AGX1P43567 385 aa1.38□□□□□ -2.19
UBX4YMR067C TAD2P47058 250 aa1.38□□□□□ -2.19
UBX4YMR067C YNL050CP53952 270 aa1.38□□□□□ -2.19
UBX4YMR067C DAD3P69850 94 aa1.38□□□□□ -2.19
UBX4YMR067C GPN3Q06543 272 aa1.38□□□□□ -2.19
UBX4YMR067C BER1Q06688 274 aaKnown RBP1.38□□□□□ -2.19
UBX4YMR067C VAC14Q06708 880 aa1.38□□□□□ -2.19
UBX4YMR067C GCD2P12754 651 aaPredicted RBP1.37□□□□□ -2.19
UBX4YMR067C RNP1P32385 249 aa1.37□□□□□ -2.19
UBX4YMR067C BLI1P35727 113 aa1.37□□□□□ -2.19
UBX4YMR067C AYR1P40471 297 aa1.37□□□□□ -2.19
UBX4YMR067C TRM44Q02648 567 aaKnown RBP1.37□□□□□ -2.19
UBX4YMR067C POM33Q12164 279 aa1.37□□□□□ -2.19
UBX4YMR067C ILV1P00927 576 aaKnown RBP1.36□□□□□ -2.19
UBX4YMR067C COS2P0CX12 379 aa1.36□□□□□ -2.19
UBX4YMR067C COS3P0CX13 379 aa1.36□□□□□ -2.19
UBX4YMR067C CCA1P21269 546 aa1.36□□□□□ -2.19
UBX4YMR067C RPC25P35718 212 aa1.36□□□□□ -2.19
UBX4YMR067C NPT1P39683 429 aaKnown RBP1.36□□□□□ -2.19
UBX4YMR067C LSM4P40070 187 aaKnown RBP1.36□□□□□ -2.19
UBX4YMR067C LOC1P43586 204 aaPredicted RBP1.36□□□□□ -2.19
UBX4YMR067C NIF3P53081 288 aa1.36□□□□□ -2.19
UBX4YMR067C ASI3P53983 676 aa1.36□□□□□ -2.19
UBX4YMR067C LOA1Q06508 300 aa1.36□□□□□ -2.19
UBX4YMR067C RPS3P05750 240 aaKnown RBP1.35□□□□□ -2.19
UBX4YMR067C DOA4P32571 926 aa1.35□□□□□ -2.19
UBX4YMR067C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.35□□□□□ -2.19not detected
UBX4YMR067C PRO2P54885 456 aaKnown RBP1.35□□□□□ -2.19
UBX4YMR067C SEC10Q06245 871 aa1.35□□□□□ -2.19
UBX4YMR067C PGC1Q08959 321 aa1.35□□□□□ -2.19
UBX4YMR067C GEP5Q12393 293 aa1.35□□□□□ -2.19
UBX4YMR067C YOS9Q99220 542 aa1.35□□□□□ -2.19
UBX4YMR067C TPM1P17536 199 aaKnown RBP1.34□□□□□ -2.19
UBX4YMR067C GPI12P23797 304 aa1.34□□□□□ -2.19
UBX4YMR067C HIS2P38635 335 aa1.34□□□□□ -2.19
UBX4YMR067C VPS45P38932 577 aa1.34□□□□□ -2.19
UBX4YMR067C SNX4P47057 423 aa1.34□□□□□ -2.19
UBX4YMR067C ICL1P28240 557 aaPredicted RBP1.33□□□□□ -2.2
UBX4YMR067C MAL32P38158 584 aa1.33□□□□□ -2.2
UBX4YMR067C RPL10P41805 221 aaKnown RBP1.33□□□□□ -2.2
UBX4YMR067C YJL028WP47062 111 aa1.33□□□□□ -2.2
UBX4YMR067C MDM34P53083 459 aa1.33□□□□□ -2.2
UBX4YMR067C SLX9P53251 210 aaPredicted RBP1.33□□□□□ -2.2
UBX4YMR067C MAL12P53341 584 aa1.33□□□□□ -2.2
UBX4YMR067C YDR286CQ05530 114 aa1.33□□□□□ -2.2
UBX4YMR067C PST1Q12355 444 aa1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms