RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C PHO90P39535 881 aa4.35□□□□□ -1.71
BUD28YLR062C UBC13P52490 153 aa4.35□□□□□ -1.71
BUD28YLR062C COS10P52924 374 aa4.35□□□□□ -1.71
BUD28YLR062C YIP5P53108 310 aa4.35□□□□□ -1.71
BUD28YLR062C NQM1P53228 333 aaPredicted RBP4.35□□□□□ -1.71
BUD28YLR062C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
BUD28YLR062C AIM36Q03798 255 aa4.35□□□□□ -1.71
BUD28YLR062C YDR391CQ04170 232 aa4.35□□□□□ -1.71
BUD28YLR062C GAT3Q07928 141 aa4.35□□□□□ -1.71
BUD28YLR062C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
BUD28YLR062C SYC1Q08553 188 aaPredicted RBP4.35□□□□□ -1.71
BUD28YLR062C SRL2Q12020 392 aa4.35□□□□□ -1.71
BUD28YLR062C ACF2Q12168 779 aa4.35□□□□□ -1.71
BUD28YLR062C GEP5Q12393 293 aa4.35□□□□□ -1.71
BUD28YLR062C SPO24Q3E752 67 aa4.35□□□□□ -1.71
BUD28YLR062C SCEIP03882 235 aa4.34□□□□□ -1.71
BUD28YLR062C RPS23AP0CX29 145 aaKnown RBP4.34□□□□□ -1.71
BUD28YLR062C RPS23BP0CX30 145 aa4.34□□□□□ -1.71
BUD28YLR062C HEM13P11353 328 aaKnown RBP4.34□□□□□ -1.71
BUD28YLR062C CDC34P14682 295 aa4.34□□□□□ -1.71
BUD28YLR062C BOS1P25385 244 aa4.34□□□□□ -1.71
BUD28YLR062C YKL107WP34251 309 aa4.34□□□□□ -1.71
BUD28YLR062C NNK1P36003 928 aa4.34□□□□□ -1.71
BUD28YLR062C APL3P38065 1025 aa4.34□□□□□ -1.71
BUD28YLR062C YBR138CP38277 524 aa4.34□□□□□ -1.71
BUD28YLR062C YIL029CP40538 142 aa4.34□□□□□ -1.71
BUD28YLR062C SFH5P47008 294 aa4.34□□□□□ -1.71
BUD28YLR062C RMD9P53140 646 aaKnown RBP4.34□□□□□ -1.71
BUD28YLR062C YPL077CQ02831 240 aa4.34□□□□□ -1.71
BUD28YLR062C SNZ1Q03148 297 aa4.34□□□□□ -1.71
BUD28YLR062C YMD8Q03697 442 aa4.34□□□□□ -1.71
BUD28YLR062C NNT1Q05874 261 aa4.34□□□□□ -1.71
BUD28YLR062C YLR040CQ07988 224 aa4.34□□□□□ -1.71
BUD28YLR062C TAF3Q12297 353 aa4.34□□□□□ -1.71
BUD28YLR062C COX5BP00425 151 aa4.33□□□□□ -1.72
BUD28YLR062C MEK1P24719 497 aaPredicted RBP4.33□□□□□ -1.72
BUD28YLR062C KRR1P25586 316 aaPredicted RBP4.33□□□□□ -1.72
BUD28YLR062C FUN19P28003 413 aaPredicted RBP4.33□□□□□ -1.72
BUD28YLR062C GLC7P32598 312 aaKnown RBP4.33□□□□□ -1.72
BUD28YLR062C MNS1P32906 549 aa4.33□□□□□ -1.72
BUD28YLR062C RPC34P32910 317 aa4.33□□□□□ -1.72
BUD28YLR062C CLG1P35190 452 aa4.33□□□□□ -1.72
BUD28YLR062C SHM2P37291 469 aaKnown RBP4.33□□□□□ -1.72
BUD28YLR062C ECM1P39715 212 aa4.33□□□□□ -1.72
BUD28YLR062C EGT2P42835 1041 aa4.33□□□□□ -1.72
BUD28YLR062C YJL055WP47044 245 aa4.33□□□□□ -1.72
BUD28YLR062C LOH1P47055 219 aa4.33□□□□□ -1.72
BUD28YLR062C ILM1P47155 203 aa4.33□□□□□ -1.72
BUD28YLR062C SBH2P52871 88 aa4.33□□□□□ -1.72
BUD28YLR062C PEF1P53238 335 aa4.33□□□□□ -1.72
BUD28YLR062C ASI3P53983 676 aa4.33□□□□□ -1.72
BUD28YLR062C YMR279CQ03263 540 aa4.33□□□□□ -1.72
BUD28YLR062C YLR345WQ06137 509 aa4.33□□□□□ -1.72
BUD28YLR062C PST2Q12335 198 aaKnown RBP4.33□□□□□ -1.72
BUD28YLR062C RRI1Q12468 440 aa4.33□□□□□ -1.72
BUD28YLR062C PCL9Q12477 304 aa4.33□□□□□ -1.72
BUD28YLR062C KIN28P06242 306 aa4.32□□□□□ -1.72
BUD28YLR062C PDE2P06776 526 aa4.32□□□□□ -1.72
BUD28YLR062C DSF1P0CX08 502 aa4.32□□□□□ -1.72
BUD28YLR062C YNR073CP0CX09 502 aa4.32□□□□□ -1.72
BUD28YLR062C FAR1P21268 830 aa4.32□□□□□ -1.72
BUD28YLR062C DBF2P22204 572 aa4.32□□□□□ -1.72
BUD28YLR062C PUB1P32588 453 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
BUD28YLR062C ECT1P33412 323 aa4.32□□□□□ -1.72
BUD28YLR062C YBR285WP38354 144 aa4.32□□□□□ -1.72
BUD28YLR062C YIR020CP40575 100 aa4.32□□□□□ -1.72
BUD28YLR062C RET2P43621 546 aa4.32□□□□□ -1.72
BUD28YLR062C NCA3P46955 337 aa4.32□□□□□ -1.72
BUD28YLR062C VOA1P53262 265 aa4.32□□□□□ -1.72
BUD28YLR062C BUD17P53727 317 aa4.32□□□□□ -1.72
BUD28YLR062C CIK1Q01649 594 aa4.32□□□□□ -1.72
BUD28YLR062C YMR315WQ04869 349 aaKnown RBP4.32□□□□□ -1.72
BUD28YLR062C MRX8Q05473 314 aa4.32□□□□□ -1.72
BUD28YLR062C BRE4Q07660 1125 aa4.32□□□□□ -1.72
BUD28YLR062C AIM6Q07716 390 aa4.32□□□□□ -1.72
BUD28YLR062C RRS1Q08746 203 aaKnown RBP4.32□□□□□ -1.72
BUD28YLR062C FSH3Q99369 266 aa4.32□□□□□ -1.72
BUD28YLR062C RPL6BP05739 176 aaKnown RBP4.31□□□□□ -1.72
BUD28YLR062C MET3P08536 511 aa4.31□□□□□ -1.72
BUD28YLR062C RPA135P22138 1203 aaKnown RBP4.31□□□□□ -1.72
BUD28YLR062C RPS5P26783 225 aaKnown RBP4.31□□□□□ -1.72
BUD28YLR062C SUR1P33300 382 aa4.31□□□□□ -1.72
BUD28YLR062C YPK3P38070 525 aa4.31□□□□□ -1.72
BUD28YLR062C YHL044WP38727 235 aa4.31□□□□□ -1.72
BUD28YLR062C IPT1P38954 527 aa4.31□□□□□ -1.72
BUD28YLR062C SOP4P39543 234 aaPredicted RBP4.31□□□□□ -1.72
BUD28YLR062C AIM10P39965 576 aaKnown RBP4.31□□□□□ -1.72
BUD28YLR062C YER121WP40076 114 aa4.31□□□□□ -1.72
BUD28YLR062C PUG1P40100 303 aa4.31□□□□□ -1.72
BUD28YLR062C FLX1P40464 311 aa4.31□□□□□ -1.72
BUD28YLR062C OST1P41543 476 aaKnown RBP4.31□□□□□ -1.72
BUD28YLR062C SAY1P53324 424 aa4.31□□□□□ -1.72
BUD28YLR062C YNL046WP53956 172 aa4.31□□□□□ -1.72
BUD28YLR062C RSM23Q01163 450 aa4.31□□□□□ -1.72
BUD28YLR062C GRX5Q02784 150 aa4.31□□□□□ -1.72
BUD28YLR062C YPR196WQ06595 470 aa4.31□□□□□ -1.72
BUD28YLR062C SNA4Q07549 140 aa4.31□□□□□ -1.72
BUD28YLR062C YLR122CQ12312 125 aa4.31□□□□□ -1.72
BUD28YLR062C RTR2Q12378 196 aa4.31□□□□□ -1.72
BUD28YLR062C TDH3P00359 332 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms