RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C TY1B-HO13535 1793 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-DR5P0C2I2 1755 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-DR6P0C2I3 1755 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-LR2P0C2I5 1755 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-LR3P0C2I6 1755 aaKnown RBP1.84□□□□□ -2.12
SHE2YKL130C TY1B-PR1P0C2I9 1755 aaKnown RBP1.84□□□□□ -2.12
SHE2YKL130C TY1B-PR2P0C2J0 1756 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-PR3P0C2J1 1755 aaKnown RBP1.84□□□□□ -2.12
SHE2YKL130C YRF1-1P0CX20 1796 aa1.84□□□□□ -2.12
SHE2YKL130C YRF1-5P0CX21 1796 aa1.84□□□□□ -2.12
SHE2YKL130C YRF1-8P0CX22 1796 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-JR1P47098 1755 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-ML2Q03434 1755 aaKnown RBP1.84□□□□□ -2.12
SHE2YKL130C TY1B-ER1Q03612 1755 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-ML1Q04711 1755 aaKnown RBP1.84□□□□□ -2.12
SHE2YKL130C TY1B-GR2Q12269 1755 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-OLQ12273 1755 aa1.84□□□□□ -2.12
SHE2YKL130C TY1B-PLQ12414 1755 aaKnown RBP1.84□□□□□ -2.12
SHE2YKL130C TY2B-BQ12491 1770 aa1.84□□□□□ -2.12
SHE2YKL130C RPS3P05750 240 aaKnown RBP1.83□□□□□ -2.12
SHE2YKL130C DAL81P21657 970 aa1.83□□□□□ -2.12
SHE2YKL130C VPS3P23643 1011 aa1.83□□□□□ -2.12
SHE2YKL130C RNA15P25299 296 aaPredicted RBP1.83□□□□□ -2.12
SHE2YKL130C POF1P25576 258 aa1.83□□□□□ -2.12
SHE2YKL130C KRE6P32486 720 aa1.83□□□□□ -2.12
SHE2YKL130C IES6P32617 166 aa1.83□□□□□ -2.12
SHE2YKL130C CDC13P32797 924 aaKnown RBP1.83□□□□□ -2.12
SHE2YKL130C YKT6P36015 200 aaKnown RBP1.83□□□□□ -2.12
SHE2YKL130C MRX3P38172 270 aa1.83□□□□□ -2.12
SHE2YKL130C RFT1P38206 574 aaPredicted RBP1.83□□□□□ -2.12
SHE2YKL130C PRS2P38620 318 aaKnown RBP1.83□□□□□ -2.12
SHE2YKL130C MSS2P40990 351 aa1.83□□□□□ -2.12
SHE2YKL130C YJR012CP47087 207 aa1.83□□□□□ -2.12
SHE2YKL130C TPN1P53099 579 aa1.83□□□□□ -2.12
SHE2YKL130C COG7P53195 279 aa1.83□□□□□ -2.12
SHE2YKL130C PEX31P53203 462 aa1.83□□□□□ -2.12
SHE2YKL130C TPS1Q00764 495 aaKnown RBP1.83□□□□□ -2.12
SHE2YKL130C RMI1Q02685 241 aa1.83□□□□□ -2.12
SHE2YKL130C RPL21AQ02753 160 aaKnown RBP1.83□□□□□ -2.12
SHE2YKL130C YML018CQ03730 393 aa1.83□□□□□ -2.12
SHE2YKL130C SEC10Q06245 871 aa1.83□□□□□ -2.12
SHE2YKL130C YOR292CQ08743 309 aa1.83□□□□□ -2.12
SHE2YKL130C YOR114WQ12219 294 aa1.83□□□□□ -2.12
SHE2YKL130C CFT1Q06632 1357 aaKnown RBP1.83□□□□□ -2.12
SHE2YKL130C YAL064W-BO13512 126 aa1.82□□□□□ -2.12
SHE2YKL130C TDH2P00358 332 aaKnown RBP1.82□□□□□ -2.12
SHE2YKL130C COX4P04037 155 aa1.82□□□□□ -2.12
SHE2YKL130C PET494P07390 489 aaPredicted RBP1.82□□□□□ -2.12
SHE2YKL130C EPT1P22140 391 aa1.82□□□□□ -2.12
SHE2YKL130C RPL24BP24000 155 aaKnown RBP1.82□□□□□ -2.12
SHE2YKL130C PEX3P28795 441 aa1.82□□□□□ -2.12
SHE2YKL130C DOA4P32571 926 aa1.82□□□□□ -2.12
SHE2YKL130C SPS19P32573 292 aaKnown RBP1.82□□□□□ -2.12
SHE2YKL130C ALK2P32789 676 aaPredicted RBP1.82□□□□□ -2.12
SHE2YKL130C TIP20P33891 701 aa1.82□□□□□ -2.12
SHE2YKL130C GPX1P36014 167 aa1.82□□□□□ -2.12
SHE2YKL130C AIM29P36154 155 aa1.82□□□□□ -2.12
SHE2YKL130C MRP21P38175 177 aa1.82□□□□□ -2.12
SHE2YKL130C LDB7P38210 180 aa1.82□□□□□ -2.12
SHE2YKL130C ALD5P40047 520 aaKnown RBP1.82□□□□□ -2.12
SHE2YKL130C OTU1P43558 301 aa1.82□□□□□ -2.12
SHE2YKL130C MIC19P43594 170 aa1.82□□□□□ -2.12
SHE2YKL130C CGR1P53188 120 aa1.82□□□□□ -2.12
SHE2YKL130C MAL13P53338 473 aa1.82□□□□□ -2.12
SHE2YKL130C PGA2P53903 129 aa1.82□□□□□ -2.12
SHE2YKL130C YNL040WP53960 456 aaPredicted RBP1.82□□□□□ -2.12
SHE2YKL130C RNY1Q02933 434 aaKnown RBP1.82□□□□□ -2.12
SHE2YKL130C VPS60Q03390 229 aa1.82□□□□□ -2.12
SHE2YKL130C VHS1Q03785 461 aa1.82□□□□□ -2.12
SHE2YKL130C API2Q04413 109 aa1.82□□□□□ -2.12
SHE2YKL130C MYO5Q04439 1219 aaKnown RBP1.82□□□□□ -2.12
SHE2YKL130C SEC13Q04491 297 aaKnown RBP1.82□□□□□ -2.12
SHE2YKL130C MIM1Q08176 113 aa1.82□□□□□ -2.12
SHE2YKL130C YOR376WQ08900 122 aa1.82□□□□□ -2.12
SHE2YKL130C CSM4Q08955 156 aa1.82□□□□□ -2.12
SHE2YKL130C YDL012CQ12489 107 aa1.82□□□□□ -2.12
SHE2YKL130C YOS9Q99220 542 aa1.82□□□□□ -2.12
SHE2YKL130C SRB8P25648 1427 aa1.82□□□□□ -2.12
SHE2YKL130C GEA1P47102 1408 aaPredicted RBP1.82□□□□□ -2.12
SHE2YKL130C MLP2P40457 1679 aa1.81□□□□□ -2.12
SHE2YKL130C TY1B-DR3Q99231 1755 aa1.81□□□□□ -2.12
SHE2YKL130C RPP0P05317 312 aaKnown RBP1.81□□□□□ -2.12
SHE2YKL130C VPH2P32341 215 aa1.81□□□□□ -2.12
SHE2YKL130C MRPL3P36516 390 aa1.81□□□□□ -2.12
SHE2YKL130C FRM2P37261 193 aa1.81□□□□□ -2.12
SHE2YKL130C YBR062CP38239 180 aa1.81□□□□□ -2.12
SHE2YKL130C MBA1P38300 278 aa1.81□□□□□ -2.12
SHE2YKL130C ECM34P38728 170 aa1.81□□□□□ -2.12
SHE2YKL130C KRE29P40026 464 aa1.81□□□□□ -2.12
SHE2YKL130C THO1P40040 218 aaKnown RBP1.81□□□□□ -2.12
SHE2YKL130C YFL064CP43540 174 aa1.81□□□□□ -2.12
SHE2YKL130C YGL262WP53054 175 aa1.81□□□□□ -2.12
SHE2YKL130C YPS5P53057 165 aa1.81□□□□□ -2.12
SHE2YKL130C VEL1P53058 206 aa1.81□□□□□ -2.12
SHE2YKL130C LIF1P53150 421 aa1.81□□□□□ -2.12
SHE2YKL130C FMP48P53233 369 aa1.81□□□□□ -2.12
SHE2YKL130C CDC14Q00684 551 aa1.81□□□□□ -2.12
SHE2YKL130C GTO3Q04806 366 aa1.81□□□□□ -2.12
SHE2YKL130C ARC18Q05933 178 aaKnown RBP1.81□□□□□ -2.12
SHE2YKL130C YPL278CQ08990 100 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms