RNA–Protein interactions for RNA: YJL209W

CBP1, Transcript of Mitochondrial protein, regulator of COB mRNA stability and translation, yeast

Gene CBP1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBP1	YJL209W	PEX22	P39718	180 aa		4.25	□□□□□ -1.73
CBP1	YJL209W	GAB1	P41733	394 aa		4.25	□□□□□ -1.73
CBP1	YJL209W	DIM1	P41819	318 aa	Known RBP	4.25	□□□□□ -1.73
CBP1	YJL209W	IRC18	P47056	224 aa		4.25	□□□□□ -1.73
CBP1	YJL209W	OST3	P48439	350 aa		4.25	□□□□□ -1.73
CBP1	YJL209W	SNO1	Q03144	224 aa		4.25	□□□□□ -1.73
CBP1	YJL209W	YHC1	Q05900	231 aa	Known RBP	4.25	□□□□□ -1.73
CBP1	YJL209W	ORM2	Q06144	216 aa		4.25	□□□□□ -1.73
CBP1	YJL209W	RPS18A	P0CX55	146 aa	Known RBP	4.24	□□□□□ -1.73
CBP1	YJL209W	RPS18B	P0CX56	146 aa	Predicted RBP	4.24	□□□□□ -1.73
CBP1	YJL209W	SRP14	P38985	146 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	COG3	P40094	801 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	YIL029C	P40538	142 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	MOB2	P43563	287 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	YLR460C	P54007	376 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	YET3	Q07451	203 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	DTD1	Q07648	150 aa	Known RBP	4.24	□□□□□ -1.73
CBP1	YJL209W	YNG1	Q08465	219 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	RRS1	Q08746	203 aa	Known RBP	4.24	□□□□□ -1.73
CBP1	YJL209W	AYT1	Q12226	474 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	YLR126C	Q12288	251 aa		4.24	□□□□□ -1.73
CBP1	YJL209W	QCR2	P07257	368 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	TPS2	P31688	896 aa	Known RBP	4.23	□□□□□ -1.73
CBP1	YJL209W	ALK2	P32789	676 aa	Predicted RBP	4.23	□□□□□ -1.73
CBP1	YJL209W	NAT2	P37293	288 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	FIG1	P38224	298 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	YBP1	P38315	674 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	UBP5	P39944	805 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	MIG2	P53035	382 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	VPS60	Q03390	229 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	YML018C	Q03730	393 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	MIM1	Q08176	113 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	WTM1	Q12363	437 aa	Known RBP	4.23	□□□□□ -1.73
CBP1	YJL209W	SNA3	P14359	133 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	CBS2	P14905	389 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	VPH2	P32341	215 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	SGE1	P33335	543 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	GPX1	P36014	167 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	YPT52	P36018	234 aa	Known RBP	4.23	□□□□□ -1.73
CBP1	YJL209W	ANR2	P36090	516 aa	Predicted RBP	4.23	□□□□□ -1.73
CBP1	YJL209W	KRE29	P40026	464 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	RPR2	P40571	144 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	TOS8	P53147	276 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	GGA1	Q06336	557 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	HEM25	Q07534	307 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	RFM1	Q12192	310 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	TPO4	Q12256	659 aa		4.23	□□□□□ -1.73
CBP1	YJL209W	PUT1	P09368	476 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	MRPL20	P22354	195 aa	Predicted RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	IFM1	P25038	676 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	ATG15	P25641	520 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	DBP7	P36120	742 aa	Known RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	MED8	P38304	223 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	BRR6	P53062	197 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	MMS2	P53152	137 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	SYF2	P53277	215 aa	Predicted RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	MSO1	P53604	210 aa	Known RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	UTP15	Q04305	513 aa	Known RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	YPL150W	Q12152	901 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	BI3	Q9ZZW7	517 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	PPH21	P23594	369 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	TRR1	P29509	319 aa	Known RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	SPS18	P32572	300 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	SRY1	P36007	326 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	MBA1	P38300	278 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	SHG1	P38337	142 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CBP1	YJL209W	WSC4	P38739	605 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	MCM22	P47167	239 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	SHY1	P53266	389 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	RHO3	Q00245	231 aa	Known RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	YDC1	Q02896	317 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	SDC1	Q03323	175 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	ERP1	Q05359	219 aa	Known RBP	4.22	□□□□□ -1.73
CBP1	YJL209W	SEI1	Q06058	285 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	TFC7	Q12415	435 aa		4.22	□□□□□ -1.73
CBP1	YJL209W	TRP1	P00912	224 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	RPL15A	P05748	204 aa	Known RBP	4.21	□□□□□ -1.74
CBP1	YJL209W	MET2	P08465	486 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	ASP3-2	P0CX77	362 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	ASP3-3	P0CX78	362 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	ASP3-4	P0CX79	362 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	ASP3-1	P0CZ17	362 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
CBP1	YJL209W	PAN6	P40459	309 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	LSM1	P47017	172 aa	Known RBP	4.21	□□□□□ -1.74
CBP1	YJL209W	JAC1	P53193	184 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	TPS1	Q00764	495 aa	Known RBP	4.21	□□□□□ -1.74
CBP1	YJL209W	PEX12	Q04370	399 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	ATP16	Q12165	160 aa		4.21	□□□□□ -1.74
CBP1	YJL209W	USB1	Q12208	290 aa	Known RBP	4.21	□□□□□ -1.74
CBP1	YJL209W	HTZ1	Q12692	134 aa	Known RBP	4.21	□□□□□ -1.74
CBP1	YJL209W	MRPL3	P36516	390 aa		4.2	□□□□□ -1.74
CBP1	YJL209W	YHR127W	P38833	243 aa	Known RBP	4.2	□□□□□ -1.74
CBP1	YJL209W	PTI1	P39927	425 aa	Predicted RBP	4.2	□□□□□ -1.74
CBP1	YJL209W	YNR066C	P53752	436 aa		4.2	□□□□□ -1.74
CBP1	YJL209W	FYV6	P53913	173 aa		4.2	□□□□□ -1.74
CBP1	YJL209W	HNT3	Q08702	217 aa		4.2	□□□□□ -1.74
CBP1	YJL209W	YDR018C	Q12185	396 aa		4.2	□□□□□ -1.74
CBP1	YJL209W	YPL229W	Q99395	206 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms