RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C SWM1Q12379 170 aa6.82□□□□□ -1.32
SNP1YIL061C BRR2P32639 2163 aaKnown RBP6.82□□□□□ -1.32
SNP1YIL061C YLR358CO13565 187 aa6.81□□□□□ -1.32
SNP1YIL061C ARG80P07249 177 aa6.81□□□□□ -1.32
SNP1YIL061C RPL3P14126 387 aaKnown RBP6.81□□□□□ -1.32
SNP1YIL061C UTR1P21373 530 aa6.81□□□□□ -1.32
SNP1YIL061C RPC34P32910 317 aa6.81□□□□□ -1.32
SNP1YIL061C PDR3P33200 976 aa6.81□□□□□ -1.32
SNP1YIL061C GLY1P37303 387 aaKnown RBP6.81□□□□□ -1.32
SNP1YIL061C RRF1P38771 230 aa6.81□□□□□ -1.32
SNP1YIL061C YER010CP40011 234 aa6.81□□□□□ -1.32
SNP1YIL061C MID1P41821 548 aa6.81□□□□□ -1.32
SNP1YIL061C YGR210CP42942 411 aa6.81□□□□□ -1.32
SNP1YIL061C DUG1P43616 481 aaKnown RBP6.81□□□□□ -1.32
SNP1YIL061C OCA1P50946 238 aaPredicted RBP6.81□□□□□ -1.32
SNP1YIL061C YIP4P53093 235 aa6.81□□□□□ -1.32
SNP1YIL061C YGR126WP53274 230 aa6.81□□□□□ -1.32
SNP1YIL061C RPL6AQ02326 176 aaKnown RBP6.81□□□□□ -1.32
SNP1YIL061C TY1A-DR2Q03964 440 aaKnown RBP6.81□□□□□ -1.32
SNP1YIL061C HEM25Q07534 307 aa6.81□□□□□ -1.32
SNP1YIL061C RDL2Q08742 149 aaKnown RBP6.81□□□□□ -1.32
SNP1YIL061C YOR376WQ08900 122 aa6.81□□□□□ -1.32
SNP1YIL061C BBP1Q12365 385 aa6.81□□□□□ -1.32
SNP1YIL061C RTR2Q12378 196 aa6.81□□□□□ -1.32
SNP1YIL061C MSW1P04803 379 aa6.8□□□□□ -1.32
SNP1YIL061C FUR4P05316 633 aaKnown RBP6.8□□□□□ -1.32
SNP1YIL061C MEK1P24719 497 aaPredicted RBP6.8□□□□□ -1.32
SNP1YIL061C FLO10P36170 1169 aa6.8□□□□□ -1.32
SNP1YIL061C UBX6P47049 396 aa6.8□□□□□ -1.32
SNP1YIL061C SCW4P53334 386 aaKnown RBP6.8□□□□□ -1.32
SNP1YIL061C BUD25P85052 153 aa6.8□□□□□ -1.32
SNP1YIL061C ATG21Q02887 496 aa6.8□□□□□ -1.32
SNP1YIL061C CGI121Q03705 181 aaKnown RBP6.8□□□□□ -1.32
SNP1YIL061C VBA1Q04301 562 aa6.8□□□□□ -1.32
SNP1YIL061C VBA4Q04602 768 aaKnown RBP6.8□□□□□ -1.32
SNP1YIL061C SYC1Q08553 188 aaPredicted RBP6.8□□□□□ -1.32
SNP1YIL061C FRE3Q08905 711 aa6.8□□□□□ -1.32
SNP1YIL061C NIP7Q08962 181 aaKnown RBP6.8□□□□□ -1.32
SNP1YIL061C HMS1Q12398 434 aa6.8□□□□□ -1.32
SNP1YIL061C RDI1Q12434 202 aa6.8□□□□□ -1.32
SNP1YIL061C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
SNP1YIL061C YAL064W-BO13512 126 aa6.79□□□□□ -1.32
SNP1YIL061C SCEIP03882 235 aa6.79□□□□□ -1.32
SNP1YIL061C URA3P03962 267 aa6.79□□□□□ -1.32
SNP1YIL061C PRB1P09232 635 aa6.79□□□□□ -1.32
SNP1YIL061C CKS1P20486 150 aaKnown RBP6.79□□□□□ -1.32
SNP1YIL061C PET18P25362 215 aa6.79□□□□□ -1.32
SNP1YIL061C CAM1P29547 415 aaKnown RBP6.79□□□□□ -1.32
SNP1YIL061C DBF20P32328 564 aa6.79□□□□□ -1.32
SNP1YIL061C MCM10P32354 571 aa6.79□□□□□ -1.32
SNP1YIL061C MSS1P32559 526 aaPredicted RBP6.79□□□□□ -1.32
SNP1YIL061C SNC2P33328 115 aa6.79□□□□□ -1.32
SNP1YIL061C YKL063CP35725 167 aa6.79□□□□□ -1.32
SNP1YIL061C PRE3P38624 215 aa6.79□□□□□ -1.32
SNP1YIL061C UME6P39001 836 aa6.79□□□□□ -1.32
SNP1YIL061C YER137CP40083 148 aaKnown RBP6.79□□□□□ -1.32
SNP1YIL061C BUD8P41698 603 aa6.79□□□□□ -1.32
SNP1YIL061C OTU1P43558 301 aa6.79□□□□□ -1.32
SNP1YIL061C SNX4P47057 423 aa6.79□□□□□ -1.32
SNP1YIL061C GPI14P47088 403 aaKnown RBP6.79□□□□□ -1.32
SNP1YIL061C POP6P53218 158 aa6.79□□□□□ -1.32
SNP1YIL061C YGR042WP53227 271 aa6.79□□□□□ -1.32
SNP1YIL061C YGR066CP53242 292 aa6.79□□□□□ -1.32
SNP1YIL061C SAM50P53969 484 aa6.79□□□□□ -1.32
SNP1YIL061C CTF19Q02732 369 aa6.79□□□□□ -1.32
SNP1YIL061C PEX25Q02969 394 aa6.79□□□□□ -1.32
SNP1YIL061C YPL039WQ03080 316 aa6.79□□□□□ -1.32
SNP1YIL061C NNT1Q05874 261 aa6.79□□□□□ -1.32
SNP1YIL061C YLR224WQ05947 369 aa6.79□□□□□ -1.32
SNP1YIL061C RAX1Q08760 435 aa6.79□□□□□ -1.32
SNP1YIL061C AKR2Q12013 749 aa6.79□□□□□ -1.32
SNP1YIL061C TMS1Q12116 473 aa6.79□□□□□ -1.32
SNP1YIL061C YBR298C-AQ8TGK4 73 aa6.79□□□□□ -1.32
SNP1YIL061C YOR032W-AQ8TGS1 66 aa6.79□□□□□ -1.32
SNP1YIL061C IRA2P19158 3079 aa6.78□□□□□ -1.32
SNP1YIL061C YPT1P01123 206 aaKnown RBP6.78□□□□□ -1.32
SNP1YIL061C RPP2BP02400 110 aaKnown RBP6.78□□□□□ -1.32
SNP1YIL061C GCD1P09032 578 aaPredicted RBP6.78□□□□□ -1.32
SNP1YIL061C PUT1P09368 476 aa6.78□□□□□ -1.32
SNP1YIL061C CTA1P15202 515 aa6.78□□□□□ -1.32
SNP1YIL061C NFS1P25374 497 aa6.78□□□□□ -1.32
SNP1YIL061C NAB2P32505 525 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
SNP1YIL061C WBP1P33767 430 aaKnown RBP6.78□□□□□ -1.32
SNP1YIL061C COS9P36034 407 aa6.78□□□□□ -1.32
SNP1YIL061C FRM2P37261 193 aa6.78□□□□□ -1.32
SNP1YIL061C SSH1P38353 490 aaKnown RBP6.78□□□□□ -1.32
SNP1YIL061C PHM8P40025 321 aa6.78□□□□□ -1.32
SNP1YIL061C PUG1P40100 303 aa6.78□□□□□ -1.32
SNP1YIL061C DLS1P40366 167 aa6.78□□□□□ -1.32
SNP1YIL061C AVT7P40501 490 aa6.78□□□□□ -1.32
SNP1YIL061C ERJ5P43613 295 aaPredicted RBP6.78□□□□□ -1.32
SNP1YIL061C ECM27P47144 725 aa6.78□□□□□ -1.32
SNP1YIL061C SLI1P53304 468 aa6.78□□□□□ -1.32
SNP1YIL061C GIS1Q03833 894 aa6.78□□□□□ -1.32
SNP1YIL061C YLR352WQ06479 807 aa6.78□□□□□ -1.32
SNP1YIL061C YLR031WQ07978 186 aa6.78□□□□□ -1.32
SNP1YIL061C TGS1Q12052 315 aa6.78□□□□□ -1.32
SNP1YIL061C FMP16Q12497 93 aa6.78□□□□□ -1.32
SNP1YIL061C YHR214C-EQ8TGK0 99 aa6.78□□□□□ -1.32
SNP1YIL061C ODC2Q99297 307 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 129.3 ms