RNA–Protein interactions for RNA: YHR065C

RRP3, Transcript of Protein involved in rRNA processing, yeast

Gene RRP3, Length 1,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP3	YHR065C	YER010C	P40011	234 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	AIM20	P40451	204 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	ATG18	P43601	500 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	PGU1	P47180	361 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	CCC1	P47818	322 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	BPL1	P48445	690 aa	Predicted RBP	4.23	□□□□□ -1.73
RRP3	YHR065C	ARO8	P53090	500 aa	Known RBP	4.23	□□□□□ -1.73
RRP3	YHR065C	MRH4	P53166	561 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	ATG21	Q02887	496 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	YPL039W	Q03080	316 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	NUP53	Q03790	475 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	MSS11	Q03825	758 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	COX20	Q04935	205 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	RRP9	Q06506	573 aa	Known RBP	4.23	□□□□□ -1.73
RRP3	YHR065C	YPR147C	Q06522	304 aa	Known RBP	4.23	□□□□□ -1.73
RRP3	YHR065C	PEX27	Q08580	376 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	RAX1	Q08760	435 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	GRE1	Q08969	168 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	YLR099W-A	Q3E798	87 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	TOR1	P35169	2470 aa		4.23	□□□□□ -1.73
RRP3	YHR065C	PDE2	P06776	526 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	CAP2	P13517	287 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	STE12	P13574	688 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	YCR102C	P25608	368 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	HOM6	P31116	359 aa	Known RBP	4.22	□□□□□ -1.73
RRP3	YHR065C	RIB7	P33312	244 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	MTH1	P35198	433 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	TMA19	P35691	167 aa	Known RBP	4.22	□□□□□ -1.73
RRP3	YHR065C	ANR2	P36090	516 aa	Predicted RBP	4.22	□□□□□ -1.73
RRP3	YHR065C	YBR137W	P38276	179 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	BNA6	P43619	295 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	RPE1	P46969	238 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	IRC18	P47056	224 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	YGL204C	P53089	101 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	SAY1	P53324	424 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	PXR1	P53335	271 aa	Predicted RBP	4.22	□□□□□ -1.73
RRP3	YHR065C	HLR1	Q04429	423 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	TSR2	Q06672	205 aa	Known RBP	4.22	□□□□□ -1.73
RRP3	YHR065C	MRPL35	Q06678	367 aa		4.22	□□□□□ -1.73
RRP3	YHR065C	RDL2	Q08742	149 aa	Known RBP	4.22	□□□□□ -1.73
RRP3	YHR065C	GCN1	P33892	2672 aa	Known RBP	4.22	□□□□□ -1.73
RRP3	YHR065C	GCN4	P03069	281 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	OPI3	P05375	206 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	SEC62	P21825	274 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	BOS1	P25385	244 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	THI4	P32318	326 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	PAU2	P32612	120 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	SEC66	P33754	206 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	SFK1	P35735	353 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	SRP102	P36057	244 aa	Predicted RBP	4.21	□□□□□ -1.73
RRP3	YHR065C	PEX32	P38292	413 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	OM14	P38325	134 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
RRP3	YHR065C	MIT1	P40002	666 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	SER3	P40054	469 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	NAS2	P40555	220 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	REE1	P40893	198 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	BRR6	P53062	197 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	TPN1	P53099	579 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	YGR126W	P53274	230 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	HOL1	P53389	586 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	PDR16	P53860	351 aa	Known RBP	4.21	□□□□□ -1.73
RRP3	YHR065C	BNA7	Q04066	261 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	VBA4	Q04602	768 aa	Known RBP	4.21	□□□□□ -1.73
RRP3	YHR065C	YMR252C	Q04814	134 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	MIM1	Q08176	113 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	YPL199C	Q08954	240 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	NIP7	Q08962	181 aa	Known RBP	4.21	□□□□□ -1.73
RRP3	YHR065C	SWM1	Q12379	170 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	MTR10	Q99189	972 aa		4.21	□□□□□ -1.73
RRP3	YHR065C	YAL064W-B	O13512	126 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	MSW1	P04803	379 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	HIS3	P06633	220 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	PDX1	P16451	410 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	UTR1	P21373	530 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	ERG4	P25340	473 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	BUD23	P25627	275 aa	Predicted RBP	4.21	□□□□□ -1.74
RRP3	YHR065C	CPR3	P25719	182 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	CAM1	P29547	415 aa	Known RBP	4.21	□□□□□ -1.74
RRP3	YHR065C	ITR1	P30605	584 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	PTH1	P38876	190 aa	Known RBP	4.21	□□□□□ -1.74
RRP3	YHR065C	ECO1	P43605	281 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	MTM1	P53320	366 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	ERV29	P53337	310 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	YDR209C	Q03480	137 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	YMR130W	Q04223	302 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	MRX8	Q05473	314 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	RBS1	Q05672	457 aa	Known RBP	4.21	□□□□□ -1.74
RRP3	YHR065C	TPO3	Q06451	622 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	YOR283W	Q12040	230 aa	Known RBP	4.21	□□□□□ -1.74
RRP3	YHR065C	MDM32	Q12171	622 aa		4.21	□□□□□ -1.74
RRP3	YHR065C	SEC16	P48415	2195 aa	Known RBP	4.21	□□□□□ -1.74
RRP3	YHR065C	SCEI	P03882	235 aa		4.2	□□□□□ -1.74
RRP3	YHR065C	CDC9	P04819	755 aa		4.2	□□□□□ -1.74
RRP3	YHR065C	YFR010W-A	P0C5N0	62 aa		4.2	□□□□□ -1.74
RRP3	YHR065C	RPS18A	P0CX55	146 aa	Known RBP	4.2	□□□□□ -1.74
RRP3	YHR065C	RPS18B	P0CX56	146 aa	Predicted RBP	4.2	□□□□□ -1.74
RRP3	YHR065C	NAM9	P27929	486 aa		4.2	□□□□□ -1.74
RRP3	YHR065C	PPA2	P28239	310 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms