RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	RPS0A	P32905	252 aa	Known RBP	1.85	□□□□□ -2.11
SPO11	YHL022C	SPT4	P32914	102 aa	Predicted RBP	1.85	□□□□□ -2.11
SPO11	YHL022C	YJL016W	P47072	561 aa		1.85	□□□□□ -2.11
SPO11	YHL022C	GTO1	P48239	356 aa		1.85	□□□□□ -2.11
SPO11	YHL022C	RAD10	P06838	210 aa		1.84	□□□□□ -2.11
SPO11	YHL022C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.84	□□□□□ -2.11	not detected
SPO11	YHL022C	DCR2	Q05924	578 aa		1.84	□□□□□ -2.11
SPO11	YHL022C	ASR1	Q06834	288 aa		1.84	□□□□□ -2.11
SPO11	YHL022C	VMA2	P16140	517 aa	Known RBP	1.83	□□□□□ -2.12
SPO11	YHL022C	SPT8	P38915	602 aa		1.83	□□□□□ -2.12
SPO11	YHL022C	FCY21	P40039	528 aa		1.83	□□□□□ -2.12
SPO11	YHL022C	VOA1	P53262	265 aa		1.83	□□□□□ -2.12
SPO11	YHL022C	CAB4	P53332	305 aa		1.83	□□□□□ -2.12
SPO11	YHL022C	FMP41	P53889	259 aa	Known RBP	1.83	□□□□□ -2.12
SPO11	YHL022C	PRO2	P54885	456 aa	Known RBP	1.83	□□□□□ -2.12
SPO11	YHL022C	VPS60	Q03390	229 aa		1.83	□□□□□ -2.12
SPO11	YHL022C	ECM18	Q04623	453 aa		1.83	□□□□□ -2.12
SPO11	YHL022C	PET494	P07390	489 aa	Predicted RBP	1.82	□□□□□ -2.12
SPO11	YHL022C	SAR1	P20606	190 aa	Known RBP	1.82	□□□□□ -2.12
SPO11	YHL022C	ARN2	P38724	620 aa		1.82	□□□□□ -2.12
SPO11	YHL022C	YHL026C	P38740	315 aa		1.82	□□□□□ -2.12
SPO11	YHL022C	YJL027C	P47063	138 aa	Predicted RBP	1.82	□□□□□ -2.12
SPO11	YHL022C	EBS1	Q03466	884 aa	Known RBP	1.82	□□□□□ -2.12
SPO11	YHL022C	TAF9	Q05027	157 aa		1.82	□□□□□ -2.12
SPO11	YHL022C	LOA1	Q06508	300 aa		1.82	□□□□□ -2.12
SPO11	YHL022C	NOT5	Q12514	560 aa	Predicted RBP	1.82	□□□□□ -2.12
SPO11	YHL022C	CSG2	P35206	410 aa		1.81	□□□□□ -2.12
SPO11	YHL022C	DRE2	P36152	348 aa		1.81	□□□□□ -2.12
SPO11	YHL022C	RRG8	Q06109	277 aa		1.81	□□□□□ -2.12
SPO11	YHL022C	CUR1	Q06469	252 aa		1.81	□□□□□ -2.12
SPO11	YHL022C	POM33	Q12164	279 aa		1.81	□□□□□ -2.12
SPO11	YHL022C	YMR316C-A	I2HB70	103 aa		1.8	□□□□□ -2.12
SPO11	YHL022C	TPM1	P17536	199 aa	Known RBP	1.8	□□□□□ -2.12
SPO11	YHL022C	CAM1	P29547	415 aa	Known RBP	1.8	□□□□□ -2.12
SPO11	YHL022C	TIF34	P40217	347 aa	Known RBP	1.8	□□□□□ -2.12
SPO11	YHL022C	GON7	P46984	123 aa		1.8	□□□□□ -2.12
SPO11	YHL022C	IBA57	P47158	497 aa		1.8	□□□□□ -2.12
SPO11	YHL022C	KEL2	P50090	882 aa		1.8	□□□□□ -2.12
SPO11	YHL022C	SDC1	Q03323	175 aa		1.8	□□□□□ -2.12
SPO11	YHL022C	YMR114C	Q04471	368 aa	Known RBP	1.8	□□□□□ -2.12
SPO11	YHL022C	VAC14	Q06708	880 aa		1.8	□□□□□ -2.12
SPO11	YHL022C	SMT3	Q12306	101 aa	Known RBP	1.8	□□□□□ -2.12
SPO11	YHL022C	GCD2	P12754	651 aa	Predicted RBP	1.79	□□□□□ -2.12
SPO11	YHL022C	TRX1	P22217	103 aa	Known RBP	1.79	□□□□□ -2.12
SPO11	YHL022C	SFC1	P33303	322 aa		1.79	□□□□□ -2.12
SPO11	YHL022C	YOR062C	P36025	268 aa		1.79	□□□□□ -2.12
SPO11	YHL022C	TDA11	P38854	504 aa		1.79	□□□□□ -2.12
SPO11	YHL022C	AGP3	P43548	558 aa		1.79	□□□□□ -2.12
SPO11	YHL022C	BER1	Q06688	274 aa	Known RBP	1.79	□□□□□ -2.12
SPO11	YHL022C	GPI12	P23797	304 aa		1.78	□□□□□ -2.12
SPO11	YHL022C	DPB2	P24482	689 aa	Predicted RBP	1.78	□□□□□ -2.12
SPO11	YHL022C	RPC25	P35718	212 aa		1.78	□□□□□ -2.12
SPO11	YHL022C	HMT1	P38074	348 aa		1.78	□□□□□ -2.12
SPO11	YHL022C	YDR089W	P38966	869 aa		1.78	□□□□□ -2.12
SPO11	YHL022C	LOC1	P43586	204 aa	Predicted RBP	1.78	□□□□□ -2.12
SPO11	YHL022C	YFR054C	P43622	192 aa		1.78	□□□□□ -2.12
SPO11	YHL022C	GPN3	Q06543	272 aa		1.78	□□□□□ -2.12
SPO11	YHL022C	YPL247C	Q12523	523 aa		1.78	□□□□□ -2.12
SPO11	YHL022C	ILV1	P00927	576 aa	Known RBP	1.77	□□□□□ -2.13
SPO11	YHL022C	RAD3	P06839	778 aa		1.77	□□□□□ -2.13
SPO11	YHL022C	PPH21	P23594	369 aa		1.77	□□□□□ -2.13
SPO11	YHL022C	PEX3	P28795	441 aa		1.77	□□□□□ -2.13
SPO11	YHL022C	YAL064W-B	O13512	126 aa		1.76	□□□□□ -2.13
SPO11	YHL022C	GDH2	P33327	1092 aa	Known RBP	1.76	□□□□□ -2.13
SPO11	YHL022C	TEM1	P38987	245 aa		1.76	□□□□□ -2.13
SPO11	YHL022C	MNN9	P39107	395 aa	Known RBP	1.76	□□□□□ -2.13
SPO11	YHL022C	YJL118W	P47022	219 aa		1.76	□□□□□ -2.13
SPO11	YHL022C	RPS3	P05750	240 aa	Known RBP	1.75	□□□□□ -2.13
SPO11	YHL022C	YCR102C	P25608	368 aa		1.75	□□□□□ -2.13
SPO11	YHL022C	HIS2	P38635	335 aa		1.75	□□□□□ -2.13
SPO11	YHL022C	NPT1	P39683	429 aa	Known RBP	1.75	□□□□□ -2.13
SPO11	YHL022C	OSW5	P40219	148 aa		1.75	□□□□□ -2.13
SPO11	YHL022C	AGX1	P43567	385 aa		1.75	□□□□□ -2.13
SPO11	YHL022C	TRM44	Q02648	567 aa	Known RBP	1.75	□□□□□ -2.13
SPO11	YHL022C	PEX12	Q04370	399 aa		1.75	□□□□□ -2.13
SPO11	YHL022C	COS2	P0CX12	379 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	COS3	P0CX13	379 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	VPS45	P38932	577 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	TAD2	P47058	250 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	PEX31	P53203	462 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	YNL050C	P53952	270 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	SEC10	Q06245	871 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	YOS9	Q99220	542 aa		1.74	□□□□□ -2.13
SPO11	YHL022C	CSM1	P25651	190 aa		1.73	□□□□□ -2.13
SPO11	YHL022C	SCM4	P32564	187 aa		1.73	□□□□□ -2.13
SPO11	YHL022C	NIF3	P53081	288 aa		1.73	□□□□□ -2.13
SPO11	YHL022C	MDM34	P53083	459 aa		1.73	□□□□□ -2.13
SPO11	YHL022C	PUT1	P09368	476 aa		1.72	□□□□□ -2.13
SPO11	YHL022C	ICL1	P28240	557 aa	Predicted RBP	1.72	□□□□□ -2.13
SPO11	YHL022C	RNP1	P32385	249 aa		1.72	□□□□□ -2.13
SPO11	YHL022C	YJL028W	P47062	111 aa		1.72	□□□□□ -2.13
SPO11	YHL022C	REX3	Q12090	404 aa		1.72	□□□□□ -2.13
SPO11	YHL022C	GEP5	Q12393	293 aa		1.72	□□□□□ -2.13
SPO11	YHL022C	BOL1	Q3E793	110 aa		1.72	□□□□□ -2.13
SPO11	YHL022C	LSM4	P40070	187 aa	Known RBP	1.71	□□□□□ -2.14
SPO11	YHL022C	SER33	P40510	469 aa		1.71	□□□□□ -2.14
SPO11	YHL022C	SLX9	P53251	210 aa	Predicted RBP	1.71	□□□□□ -2.14
SPO11	YHL022C	DAD3	P69850	94 aa		1.71	□□□□□ -2.14
SPO11	YHL022C	BCP1	Q06338	283 aa		1.71	□□□□□ -2.14
SPO11	YHL022C	AI5_BETA	Q9ZZX0	354 aa		1.71	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms