RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC43	YGL155W	GAS2	Q06135	555 aa		4.88	□□□□□ -1.63
CDC43	YGL155W	ANT1	Q06497	328 aa		4.88	□□□□□ -1.63
CDC43	YGL155W	YOR385W	Q08909	290 aa		4.88	□□□□□ -1.63
CDC43	YGL155W	LYS21	Q12122	440 aa	Known RBP	4.88	□□□□□ -1.63
CDC43	YGL155W	YLR108C	Q12259	485 aa		4.88	□□□□□ -1.63
CDC43	YGL155W	YDR262W	Q12331	272 aa		4.88	□□□□□ -1.63
CDC43	YGL155W	AAC1	P04710	309 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	PHO2	P07269	559 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	PUT1	P09368	476 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	MATALPHA1	P0CY06	175 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	HMLALPHA1	P0CY07	175 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	MRP2	P10663	115 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC43	YGL155W	COQ2	P32378	372 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	DCG1	P32460	244 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	RML2	P32611	393 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	PTR2	P32901	601 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	AVT7	P40501	490 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	GLR1	P41921	483 aa	Known RBP	4.87	□□□□□ -1.63
CDC43	YGL155W	SRB7	P47822	140 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	YGR012W	P53206	393 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	TPC1	P53257	314 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	SLI1	P53304	468 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	SPR28	Q04921	423 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	MRX8	Q05473	314 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	NMA1	Q06178	401 aa	Known RBP	4.87	□□□□□ -1.63
CDC43	YGL155W	GIC2	Q06648	383 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	COQ10	Q08058	207 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	TMS1	Q12116	473 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	SET6	Q12529	373 aa		4.87	□□□□□ -1.63
CDC43	YGL155W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC43	YGL155W	TOM1	Q03280	3268 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	CHO1	P08456	276 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	PRB1	P09232	635 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	SSA3	P09435	649 aa	Known RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	STE50	P25344	346 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	LDS1	P31379	325 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	MRP20	P32387	263 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	SUA5	P32579	426 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	YKL097C	P34245	136 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	SRP102	P36057	244 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	YKR073C	P36153	106 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CDC43	YGL155W	OCA5	P38738	679 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	RPP1	P38786	293 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	LSM12	P38828	187 aa	Known RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	BAT1	P38891	393 aa	Known RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	TIF34	P40217	347 aa	Known RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	UTP25	P40498	721 aa	Known RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	TAD2	P47058	250 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	YGR042W	P53227	271 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	SCW4	P53334	386 aa	Known RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	CWC24	P53769	259 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	SMX3	P54999	86 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	APM1	Q00776	475 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CDC43	YGL155W	NCE101	Q02820	53 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	DAL4	Q04895	635 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	YLR352W	Q06479	807 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	NOC4	Q06512	552 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	YFT2	Q06676	274 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	THI73	Q07904	523 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	AVO1	Q08236	1176 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	ALG6	Q12001	544 aa	Known RBP	4.86	□□□□□ -1.63
CDC43	YGL155W	MCP1	Q12106	302 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	ORT1	Q12375	292 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	NPC2	Q12408	173 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	RRI1	Q12468	440 aa		4.86	□□□□□ -1.63
CDC43	YGL155W	GAS1	P22146	559 aa	Known RBP	4.85	□□□□□ -1.63
CDC43	YGL155W	HXT2	P23585	541 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	CNB1	P25296	175 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	RNQ1	P25367	405 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	SNC2	P33328	115 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	KAE1	P36132	386 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	YPC1	P38298	316 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	MTC4	P38335	694 aa	Known RBP	4.85	□□□□□ -1.63
CDC43	YGL155W	FMO1	P38866	432 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	GCV3	P39726	170 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC43	YGL155W	VPS52	P39904	641 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	SSO2	P39926	295 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	PUG1	P40100	303 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	YIL067C	P40514	678 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	IDP2	P41939	412 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	ECL1	P48235	211 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	LYS20	P48570	428 aa	Known RBP	4.85	□□□□□ -1.63
CDC43	YGL155W	MPP6	P53725	186 aa	Predicted RBP	4.85	□□□□□ -1.63
CDC43	YGL155W	YLR460C	P54007	376 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	YLR152C	P54072	576 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	MRPL1	Q04599	285 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	ZEO1	Q08245	113 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	YOS9	Q99220	542 aa		4.85	□□□□□ -1.63
CDC43	YGL155W	MSW1	P04803	379 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	RPS13	P05756	151 aa	Known RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	RPL20A	P0CX23	172 aa	Known RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	RPL20B	P0CX24	172 aa	Predicted RBP	4.84	□□□□□ -1.63
CDC43	YGL155W	URA6	P15700	204 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	GPI12	P23797	304 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	CPR4	P25334	318 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	ADH7	P25377	361 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	DBF20	P32328	564 aa		4.84	□□□□□ -1.63
CDC43	YGL155W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms