RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W URA8P38627 578 aaPredicted RBP5.11□□□□□ -1.59
LCP5YER127W YGR018CP53211 109 aa5.11□□□□□ -1.59
LCP5YER127W VOA1P53262 265 aa5.11□□□□□ -1.59
LCP5YER127W NRM1P53718 249 aa5.11□□□□□ -1.59
LCP5YER127W DBP6P53734 629 aaKnown RBP5.11□□□□□ -1.59
LCP5YER127W REP1P03871 373 aa5.1□□□□□ -1.59
LCP5YER127W SPS100P13130 326 aa5.1□□□□□ -1.59
LCP5YER127W CTA1P15202 515 aa5.1□□□□□ -1.59
LCP5YER127W BGL2P15703 313 aaKnown RBP5.1□□□□□ -1.59
LCP5YER127W RPC25P35718 212 aa5.1□□□□□ -1.59
LCP5YER127W YET1P35723 206 aa5.1□□□□□ -1.59
LCP5YER127W YKL162CP36052 402 aa5.1□□□□□ -1.59
LCP5YER127W VHS1Q03785 461 aa5.1□□□□□ -1.59
LCP5YER127W YMR111CQ04461 462 aaPredicted RBP5.1□□□□□ -1.59
LCP5YER127W PFK27Q12471 397 aaPredicted RBP5.1□□□□□ -1.59
LCP5YER127W CAR2P07991 424 aaKnown RBP5.09□□□□□ -1.59
LCP5YER127W EPT1P22140 391 aa5.09□□□□□ -1.59
LCP5YER127W DTR1P38125 572 aa5.09□□□□□ -1.59
LCP5YER127W SMP1P38128 452 aa5.09□□□□□ -1.59
LCP5YER127W EDC3P39998 551 aaKnown RBP5.09□□□□□ -1.59
LCP5YER127W PCL7P40186 285 aa5.09□□□□□ -1.59
LCP5YER127W TIF34P40217 347 aaKnown RBP5.09□□□□□ -1.59
LCP5YER127W SCS7Q03529 384 aa5.09□□□□□ -1.59
LCP5YER127W INP2Q03824 705 aa5.09□□□□□ -1.59
LCP5YER127W PER33Q12144 273 aa5.09□□□□□ -1.59
LCP5YER127W YLR046CQ12253 270 aa5.09□□□□□ -1.59
LCP5YER127W SEY1Q99287 776 aa5.09□□□□□ -1.59
LCP5YER127W MET16P18408 261 aaPredicted RBP5.08□□□□□ -1.6
LCP5YER127W SAR1P20606 190 aaKnown RBP5.08□□□□□ -1.6
LCP5YER127W RRF1P38771 230 aa5.08□□□□□ -1.6
LCP5YER127W YIL054WP40524 105 aa5.08□□□□□ -1.6
LCP5YER127W ASG7P46993 209 aa5.08□□□□□ -1.6
LCP5YER127W YPL113CQ02961 396 aa5.08□□□□□ -1.6
LCP5YER127W PEX11Q12462 236 aa5.08□□□□□ -1.6
LCP5YER127W BI3Q9ZZW7 517 aa5.08□□□□□ -1.6
LCP5YER127W RAD23P32628 398 aaKnown RBP5.07□□□□□ -1.6
LCP5YER127W ZRT1P32804 376 aa5.07□□□□□ -1.6
LCP5YER127W CHL4P38907 458 aa5.07□□□□□ -1.6
LCP5YER127W SEO1P39709 593 aa5.07□□□□□ -1.6
LCP5YER127W SER33P40510 469 aa5.07□□□□□ -1.6
LCP5YER127W INA22P40576 216 aa5.07□□□□□ -1.6
LCP5YER127W HIT1P46973 164 aa5.07□□□□□ -1.6
LCP5YER127W COG7P53195 279 aa5.07□□□□□ -1.6
LCP5YER127W SWS2P53937 143 aa5.07□□□□□ -1.6
LCP5YER127W YPL080CQ02826 108 aa5.07□□□□□ -1.6
LCP5YER127W RDL2Q08742 149 aaKnown RBP5.07□□□□□ -1.6
LCP5YER127W MMT2Q08970 484 aa5.07□□□□□ -1.6
LCP5YER127W DCP1Q12517 231 aaPredicted RBP5.07□□□□□ -1.6
LCP5YER127W YKR104WP0CE69 306 aa5.06□□□□□ -1.6
LCP5YER127W YER189WP40104 122 aa5.06□□□□□ -1.6
LCP5YER127W YPR114WQ06107 315 aa5.06□□□□□ -1.6
LCP5YER127W VAC14Q06708 880 aa5.06□□□□□ -1.6
LCP5YER127W PBP4Q07362 185 aaKnown RBP5.06□□□□□ -1.6
LCP5YER127W EFG1Q3E705 233 aaKnown RBP5.06□□□□□ -1.6
LCP5YER127W BRR2P32639 2163 aaKnown RBP5.06□□□□□ -1.6
LCP5YER127W STE2D6VTK4 431 aa5.05□□□□□ -1.6
LCP5YER127W MSS116P15424 664 aaKnown RBP5.05□□□□□ -1.6
LCP5YER127W ERD1P16151 362 aa5.05□□□□□ -1.6
LCP5YER127W SPS19P32573 292 aaKnown RBP5.05□□□□□ -1.6
LCP5YER127W MID2P36027 376 aa5.05□□□□□ -1.6
LCP5YER127W ECM34P38728 170 aa5.05□□□□□ -1.6
LCP5YER127W GGC1P38988 300 aa5.05□□□□□ -1.6
LCP5YER127W YEL028WP39989 153 aa5.05□□□□□ -1.6
LCP5YER127W GLG2P47011 380 aa5.05□□□□□ -1.6
LCP5YER127W PIR1Q03178 341 aa5.05□□□□□ -1.6
LCP5YER127W KAP95Q06142 861 aaKnown RBP5.05□□□□□ -1.6
LCP5YER127W MRX9Q07349 420 aaKnown RBP5.05□□□□□ -1.6
LCP5YER127W POL2P21951 2222 aaKnown RBP5.05□□□□□ -1.6
LCP5YER127W DAL80P26343 269 aa5.04□□□□□ -1.6
LCP5YER127W MRPS9P38120 278 aa5.04□□□□□ -1.6
LCP5YER127W RRT13P40042 185 aa5.04□□□□□ -1.6
LCP5YER127W PNC1P53184 216 aaKnown RBP5.04□□□□□ -1.6
LCP5YER127W TPC1P53257 314 aa5.04□□□□□ -1.6
LCP5YER127W YDR222WQ04925 415 aa5.04□□□□□ -1.6
LCP5YER127W FAR10Q06001 478 aa5.04□□□□□ -1.6
LCP5YER127W RRG8Q06109 277 aa5.04□□□□□ -1.6
LCP5YER127W LDB18Q07887 179 aa5.04□□□□□ -1.6
LCP5YER127W RAD7P06779 565 aa5.03□□□□□ -1.6
LCP5YER127W TAE1P38340 232 aa5.03□□□□□ -1.6
LCP5YER127W LOH1P47055 219 aa5.03□□□□□ -1.6
LCP5YER127W YNL040WP53960 456 aaPredicted RBP5.03□□□□□ -1.6
LCP5YER127W API2Q04413 109 aa5.03□□□□□ -1.6
LCP5YER127W RAX2Q12465 1220 aa5.03□□□□□ -1.6
LCP5YER127W GAL7P08431 366 aa5.02□□□□□ -1.61
LCP5YER127W YHR035WP38769 630 aa5.02□□□□□ -1.61
LCP5YER127W AIM18P38884 321 aa5.02□□□□□ -1.61
LCP5YER127W EMC4P53073 190 aa5.02□□□□□ -1.61
LCP5YER127W OKP1P53298 406 aa5.02□□□□□ -1.61
LCP5YER127W YML096WQ04489 525 aa5.02□□□□□ -1.61
LCP5YER127W SWC7Q06707 132 aa5.02□□□□□ -1.61
LCP5YER127W DTD1Q07648 150 aaKnown RBP5.02□□□□□ -1.61
LCP5YER127W YOL029CQ08187 201 aa5.02□□□□□ -1.61
LCP5YER127W PRM4Q12498 284 aa5.02□□□□□ -1.61
LCP5YER127W YIL002W-AQ3E7Z5 69 aa5.02□□□□□ -1.61
LCP5YER127W IZH4Q99393 312 aa5.02□□□□□ -1.61
LCP5YER127W UGA1P17649 471 aa5.01□□□□□ -1.61
LCP5YER127W DBP3P20447 523 aaKnown RBP5.01□□□□□ -1.61
LCP5YER127W MEI4P29467 408 aa5.01□□□□□ -1.61
LCP5YER127W CBF5P33322 483 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
LCP5YER127W YFL012WP43580 148 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 146.6 ms