RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W PPG1P32838 368 aa7.09□□□□□ -1.27
YRF1-1YDR545W PFA3P42836 336 aa7.09□□□□□ -1.27
YRF1-1YDR545W YGR079WP53249 370 aa7.09□□□□□ -1.27
YRF1-1YDR545W RHO4Q00246 291 aa7.09□□□□□ -1.27
YRF1-1YDR545W YDR132CQ03900 495 aa7.09□□□□□ -1.27
YRF1-1YDR545W ECM22Q05958 814 aaPredicted RBP7.09□□□□□ -1.27
YRF1-1YDR545W MMP1Q12372 583 aa7.09□□□□□ -1.27
YRF1-1YDR545W RNA15P25299 296 aaPredicted RBP7.09□□□□□ -1.28
YRF1-1YDR545W SEF1P34228 1148 aa7.09□□□□□ -1.28
YRF1-1YDR545W GMH1P36125 273 aa7.09□□□□□ -1.28
YRF1-1YDR545W SCO2P38072 301 aa7.09□□□□□ -1.28
YRF1-1YDR545W GIP2P40036 548 aa7.09□□□□□ -1.28
YRF1-1YDR545W YGL262WP53054 175 aa7.09□□□□□ -1.28
YRF1-1YDR545W YGR117CP53270 476 aa7.09□□□□□ -1.28
YRF1-1YDR545W MTQ1P53944 314 aa7.09□□□□□ -1.28
YRF1-1YDR545W LAP3Q01532 483 aaKnown RBP RIP-Chip data7.09□□□□□ -1.28not detected
YRF1-1YDR545W YPL067CQ02754 198 aa7.09□□□□□ -1.28
YRF1-1YDR545W TPP1Q03796 238 aa7.09□□□□□ -1.28
YRF1-1YDR545W APA1P16550 321 aaKnown RBP7.08□□□□□ -1.28
YRF1-1YDR545W SEC22P22214 214 aa7.08□□□□□ -1.28
YRF1-1YDR545W SSH4P32343 579 aa7.08□□□□□ -1.28
YRF1-1YDR545W SOL1P50278 321 aa7.08□□□□□ -1.28
YRF1-1YDR545W OGG1P53397 376 aaPredicted RBP7.08□□□□□ -1.28
YRF1-1YDR545W APJ1P53940 528 aa7.08□□□□□ -1.28
YRF1-1YDR545W ODC2Q99297 307 aa7.08□□□□□ -1.28
YRF1-1YDR545W ATP5P09457 212 aa7.08□□□□□ -1.28
YRF1-1YDR545W POP5P28005 173 aa7.08□□□□□ -1.28
YRF1-1YDR545W MOB2P43563 287 aa7.08□□□□□ -1.28
YRF1-1YDR545W AGX1P43567 385 aa7.08□□□□□ -1.28
YRF1-1YDR545W YGL185CP53100 379 aa7.08□□□□□ -1.28
YRF1-1YDR545W TDA6Q06466 467 aa7.08□□□□□ -1.28
YRF1-1YDR545W PRS5Q12265 496 aaKnown RBP7.08□□□□□ -1.28
YRF1-1YDR545W PST1Q12355 444 aa7.08□□□□□ -1.28
YRF1-1YDR545W YDL085C-AQ3E7B7 68 aaKnown RBP7.08□□□□□ -1.28
YRF1-1YDR545W MCK1P21965 375 aaKnown RBP7.08□□□□□ -1.28
YRF1-1YDR545W TRX3P25372 127 aa7.08□□□□□ -1.28
YRF1-1YDR545W DEG1P31115 442 aaKnown RBP7.08□□□□□ -1.28
YRF1-1YDR545W MRPL9P31334 269 aa7.08□□□□□ -1.28
YRF1-1YDR545W MKK1P32490 508 aa7.08□□□□□ -1.28
YRF1-1YDR545W SWI5P08153 709 aa7.08□□□□□ -1.28
YRF1-1YDR545W YML018CQ03730 393 aa7.08□□□□□ -1.28
YRF1-1YDR545W AIM6Q07716 390 aa7.08□□□□□ -1.28
YRF1-1YDR545W SAC7P17121 654 aa7.07□□□□□ -1.28
YRF1-1YDR545W ERP1Q05359 219 aaKnown RBP7.07□□□□□ -1.28
YRF1-1YDR545W POT1P27796 417 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
YRF1-1YDR545W ALK2P32789 676 aaPredicted RBP7.07□□□□□ -1.28
YRF1-1YDR545W AVT7P40501 490 aa7.07□□□□□ -1.28
YRF1-1YDR545W YAP1802P53309 568 aa7.07□□□□□ -1.28
YRF1-1YDR545W YVH1Q02256 364 aaKnown RBP7.07□□□□□ -1.28
YRF1-1YDR545W ELP4Q02884 456 aaKnown RBP7.07□□□□□ -1.28
YRF1-1YDR545W YLR456WQ06199 204 aa7.07□□□□□ -1.28
YRF1-1YDR545W IRC10Q08118 586 aa7.07□□□□□ -1.28
YRF1-1YDR545W YPR096CO13587 100 aa7.07□□□□□ -1.28
YRF1-1YDR545W YHR127WP38833 243 aaKnown RBP7.07□□□□□ -1.28
YRF1-1YDR545W CHS7P38843 316 aa7.07□□□□□ -1.28
YRF1-1YDR545W PEX11Q12462 236 aa7.07□□□□□ -1.28
YRF1-1YDR545W UBR1P19812 1950 aa7.07□□□□□ -1.28
YRF1-1YDR545W RIP1P08067 215 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-LR1P0C2J4 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-FP0CX61 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-GR2P0CX62 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-CP25383 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W YBR292CP38357 123 aa7.07□□□□□ -1.28
YRF1-1YDR545W PAU15P40585 124 aa7.07□□□□□ -1.28
YRF1-1YDR545W YMR178WQ03219 274 aaKnown RBP7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-DR2Q03483 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-BQ12260 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-OR2Q12293 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-DR1Q12392 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-OR1Q12439 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W AGC1Q12482 902 aa7.07□□□□□ -1.28
YRF1-1YDR545W YLR149CQ99296 730 aa7.07□□□□□ -1.28
YRF1-1YDR545W TY2A-DR3Q99303 438 aa7.07□□□□□ -1.28
YRF1-1YDR545W DSS4P32601 143 aa7.06□□□□□ -1.28
YRF1-1YDR545W FMP10P40098 244 aa7.06□□□□□ -1.28
YRF1-1YDR545W UBP8P50102 471 aa7.06□□□□□ -1.28
YRF1-1YDR545W YOR365CQ08844 703 aa7.06□□□□□ -1.28
YRF1-1YDR545W FCY22Q12119 530 aa7.06□□□□□ -1.28
YRF1-1YDR545W HKR1P41809 1802 aa7.06□□□□□ -1.28
YRF1-1YDR545W SSU72P53538 206 aaPredicted RBP7.06□□□□□ -1.28
YRF1-1YDR545W MRI1Q06489 411 aaKnown RBP7.06□□□□□ -1.28
YRF1-1YDR545W SME1Q12330 94 aaPredicted RBP7.06□□□□□ -1.28
YRF1-1YDR545W CKA1P15790 372 aa7.06□□□□□ -1.28
YRF1-1YDR545W DOA1P36037 715 aa7.06□□□□□ -1.28
YRF1-1YDR545W VAM3Q12241 283 aa7.06□□□□□ -1.28
YRF1-1YDR545W QRI7P43122 407 aa7.06□□□□□ -1.28
YRF1-1YDR545W MTM1P53320 366 aa7.06□□□□□ -1.28
YRF1-1YDR545W PRE1P22141 198 aaKnown RBP7.05□□□□□ -1.28
YRF1-1YDR545W YEL073CP39974 107 aa7.05□□□□□ -1.28
YRF1-1YDR545W YEL057CP39983 233 aa7.05□□□□□ -1.28
YRF1-1YDR545W SYS1P41544 203 aa7.05□□□□□ -1.28
YRF1-1YDR545W YNL034WP53963 612 aa7.05□□□□□ -1.28
YRF1-1YDR545W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
YRF1-1YDR545W ADD37Q03233 198 aa7.05□□□□□ -1.28
YRF1-1YDR545W YDR248CQ03786 193 aa7.05□□□□□ -1.28
YRF1-1YDR545W LEA1Q08963 238 aaPredicted RBP7.05□□□□□ -1.28
YRF1-1YDR545W ERP4Q12450 207 aa7.05□□□□□ -1.28
YRF1-1YDR545W COX5BP00425 151 aa7.05□□□□□ -1.28
YRF1-1YDR545W COX9P07255 59 aa7.05□□□□□ -1.28
YRF1-1YDR545W RPL31AP0C2H8 113 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms