RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	HIS1	P00498	297 aa	Known RBP	3.17	□□□□□ -1.9
NSE3	YDR288W	POF1	P25576	258 aa		3.17	□□□□□ -1.9
NSE3	YDR288W	ERG2	P32352	222 aa		3.17	□□□□□ -1.9
NSE3	YDR288W	IME2	P32581	645 aa		3.17	□□□□□ -1.9
NSE3	YDR288W	SHC1	P39000	512 aa		3.17	□□□□□ -1.9
NSE3	YDR288W	TRM44	Q02648	567 aa	Known RBP	3.17	□□□□□ -1.9
NSE3	YDR288W	MRP1	P10662	321 aa	Known RBP	3.16	□□□□□ -1.9
NSE3	YDR288W	ATG15	P25641	520 aa		3.16	□□□□□ -1.9
NSE3	YDR288W	PEX3	P28795	441 aa		3.16	□□□□□ -1.9
NSE3	YDR288W	SMC2	P38989	1170 aa	Known RBP	3.16	□□□□□ -1.9
NSE3	YDR288W	MIG2	P53035	382 aa		3.16	□□□□□ -1.9
NSE3	YDR288W	ALG9	P53868	555 aa	Known RBP	3.16	□□□□□ -1.9
NSE3	YDR288W	TVP15	Q03860	143 aa		3.16	□□□□□ -1.9
NSE3	YDR288W	YOS9	Q99220	542 aa		3.16	□□□□□ -1.9
NSE3	YDR288W	NUP157	P40064	1391 aa	Known RBP	3.15	□□□□□ -1.9
NSE3	YDR288W	YEL009C-A	A0A023PZF2	135 aa		3.15	□□□□□ -1.91
NSE3	YDR288W	ALK2	P32789	676 aa	Predicted RBP	3.15	□□□□□ -1.91
NSE3	YDR288W	TRM7	P38238	310 aa	Known RBP	3.15	□□□□□ -1.91
NSE3	YDR288W	ATG12	P38316	186 aa		3.15	□□□□□ -1.91
NSE3	YDR288W	COA1	P40452	197 aa		3.15	□□□□□ -1.91
NSE3	YDR288W	PRR2	Q12310	699 aa		3.15	□□□□□ -1.91
NSE3	YDR288W	ATG5	Q12380	294 aa		3.15	□□□□□ -1.91
NSE3	YDR288W	RRP36	Q12481	300 aa	Predicted RBP	3.15	□□□□□ -1.91
NSE3	YDR288W	YHI9	P38765	294 aa		3.14	□□□□□ -1.91
NSE3	YDR288W	YJL118W	P47022	219 aa		3.14	□□□□□ -1.91
NSE3	YDR288W	FMP41	P53889	259 aa	Known RBP	3.14	□□□□□ -1.91
NSE3	YDR288W	ATC1	Q04005	294 aa		3.14	□□□□□ -1.91
NSE3	YDR288W	ARV1	Q06541	321 aa		3.14	□□□□□ -1.91
NSE3	YDR288W	RLP24	Q07915	199 aa	Known RBP	3.14	□□□□□ -1.91
NSE3	YDR288W	BTS1	Q12051	335 aa		3.14	□□□□□ -1.91
NSE3	YDR288W	RFM1	Q12192	310 aa		3.14	□□□□□ -1.91
NSE3	YDR288W	RPL4A	P10664	362 aa	Known RBP	3.13	□□□□□ -1.91
NSE3	YDR288W	SPL2	P38839	148 aa		3.13	□□□□□ -1.91
NSE3	YDR288W	DDI1	P40087	428 aa		3.13	□□□□□ -1.91
NSE3	YDR288W	RPL4B	P49626	362 aa	Known RBP	3.13	□□□□□ -1.91
NSE3	YDR288W	MNT4	P53745	580 aa		3.13	□□□□□ -1.91
NSE3	YDR288W	KAP95	Q06142	861 aa	Known RBP	3.13	□□□□□ -1.91
NSE3	YDR288W	MET2	P08465	486 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	SER33	P40510	469 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	YJL144W	P47009	104 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	YJR012C	P47087	207 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	HSH155	P49955	971 aa	Known RBP	3.12	□□□□□ -1.91
NSE3	YDR288W	YGL088W	P53151	121 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	ALG11	P53954	548 aa	Known RBP	3.12	□□□□□ -1.91
NSE3	YDR288W	CDC14	Q00684	551 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
NSE3	YDR288W	OST6	Q03723	332 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	COX20	Q04935	205 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	TIM22	Q12328	207 aa		3.12	□□□□□ -1.91
NSE3	YDR288W	DAL82	P21705	255 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	YUH1	P35127	236 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	NPT1	P39683	429 aa	Known RBP	3.11	□□□□□ -1.91
NSE3	YDR288W	SPO73	P40031	143 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	SCC4	P40090	624 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	YNL095C	P53932	642 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	SDC1	Q03323	175 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	ADH6	Q04894	360 aa	Known RBP	3.11	□□□□□ -1.91
NSE3	YDR288W	YOL107W	Q12239	342 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	SME1	Q12330	94 aa	Predicted RBP	3.11	□□□□□ -1.91
NSE3	YDR288W	STH1	P32597	1359 aa		3.11	□□□□□ -1.91
NSE3	YDR288W	PAN1	P32521	1480 aa		3.1	□□□□□ -1.91
NSE3	YDR288W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
NSE3	YDR288W	SUR2	P38992	349 aa		3.1	□□□□□ -1.91
NSE3	YDR288W	SLX9	P53251	210 aa	Predicted RBP	3.1	□□□□□ -1.91
NSE3	YDR288W	PEX10	Q05568	337 aa		3.1	□□□□□ -1.91
NSE3	YDR288W	ISD11	Q6Q560	94 aa		3.1	□□□□□ -1.91
NSE3	YDR288W	AI5_BETA	Q9ZZX0	354 aa		3.1	□□□□□ -1.91
NSE3	YDR288W	COX2	P00410	251 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	RPP0	P05317	312 aa	Known RBP	3.09	□□□□□ -1.91
NSE3	YDR288W	MIG1	P27705	504 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	CSG2	P35206	410 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	CAB3	P36076	571 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	HMT1	P38074	348 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	ARN2	P38724	620 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	PRM9	P39551	298 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	RPL10	P41805	221 aa	Known RBP	3.09	□□□□□ -1.91
NSE3	YDR288W	YPL039W	Q03080	316 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	LOA1	Q06508	300 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	YOL019W	Q08157	551 aa		3.09	□□□□□ -1.91
NSE3	YDR288W	RRT12	P25381	491 aa		3.08	□□□□□ -1.92
NSE3	YDR288W	NIF3	P53081	288 aa		3.08	□□□□□ -1.92
NSE3	YDR288W	MAL13	P53338	473 aa		3.08	□□□□□ -1.92
NSE3	YDR288W	SWS2	P53937	143 aa		3.08	□□□□□ -1.92
NSE3	YDR288W	YDR209C	Q03480	137 aa		3.08	□□□□□ -1.92
NSE3	YDR288W	RSR1	P13856	272 aa		3.07	□□□□□ -1.92
NSE3	YDR288W	POL30	P15873	258 aa	Known RBP	3.07	□□□□□ -1.92
NSE3	YDR288W	RSA4	P25382	515 aa	Known RBP	3.07	□□□□□ -1.92
NSE3	YDR288W	BMH1	P29311	267 aa	Known RBP	3.07	□□□□□ -1.92
NSE3	YDR288W	YKR032W	P36127	104 aa		3.07	□□□□□ -1.92
NSE3	YDR288W	NBP35	P52920	328 aa		3.07	□□□□□ -1.92
NSE3	YDR288W	DIA1	P54005	336 aa		3.07	□□□□□ -1.92
NSE3	YDR288W	EBS1	Q03466	884 aa	Known RBP	3.07	□□□□□ -1.92
NSE3	YDR288W	YPL119C-A	Q3E751	87 aa		3.07	□□□□□ -1.92
NSE3	YDR288W	ZWF1	P11412	505 aa	Known RBP	3.06	□□□□□ -1.92
NSE3	YDR288W	KRE1	P17260	313 aa		3.06	□□□□□ -1.92
NSE3	YDR288W	VPS3	P23643	1011 aa		3.06	□□□□□ -1.92
NSE3	YDR288W	YHL049C	P38722	271 aa		3.06	□□□□□ -1.92
NSE3	YDR288W	CTS2	Q06350	511 aa		3.06	□□□□□ -1.92
NSE3	YDR288W	RRT8	Q08219	342 aa		3.06	□□□□□ -1.92
NSE3	YDR288W	INO80	P53115	1489 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms