RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	COX20	Q04935	205 aa		4.23	□□□□□ -1.73
SUP35	YDR172W	FMP40	Q08968	688 aa	Predicted RBP	4.23	□□□□□ -1.73
SUP35	YDR172W	SEN1	Q00416	2231 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	ARF1	P11076	181 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	HMG1	P12683	1054 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	RNA14	P25298	677 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	LST4	P34239	828 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	SFK1	P35735	353 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	YKL071W	P36086	256 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	PKP1	P40530	394 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	HXT9	P40885	567 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	RPE1	P46969	238 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	BRR6	P53062	197 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	FMP48	P53233	369 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	YGR266W	P53326	701 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	HXT11	P54862	567 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	MRPS16	Q02608	121 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	SPC19	Q03954	165 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	PAL1	Q05518	499 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	PRP46	Q12417	451 aa	Predicted RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	RPS13	P05756	151 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	COX9	P07255	59 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	FAA1	P30624	700 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SUP35	YDR172W	NIC96	P34077	839 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	VBA2	P38358	474 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	YER137C	P40083	148 aa	Known RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	BAP3	P41815	604 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	MTL1	P53214	551 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	ASI3	P53983	676 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	AIM36	Q03798	255 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	UTP21	Q06078	939 aa	Predicted RBP	4.22	□□□□□ -1.73
SUP35	YDR172W	GAS2	Q06135	555 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	KEI1	Q06346	221 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	YPL272C	Q08984	517 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	MCP1	Q12106	302 aa		4.22	□□□□□ -1.73
SUP35	YDR172W	OPI3	P05375	206 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	DAL82	P21705	255 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	CNE1	P27825	502 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	KRE6	P32486	720 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	GPX1	P36014	167 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	YHR180W	P38868	163 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	YHR210C	P38893	341 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	YIL060W	P40519	144 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	IRC24	P40580	263 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	AIM25	P47140	327 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	YLR460C	P54007	376 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	SEI1	Q06058	285 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	YLR352W	Q06479	807 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	TMS1	Q12116	473 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	FMP16	Q12497	93 aa		4.21	□□□□□ -1.74
SUP35	YDR172W	QCR7	P00128	127 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	PRB1	P09232	635 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	CDC26	P14724	124 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	GLK1	P17709	500 aa	Known RBP	4.2	□□□□□ -1.74
SUP35	YDR172W	NUP1	P20676	1076 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	PPA2	P28239	310 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	MTC7	P32633	139 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	EMP70	P32802	667 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	SLC1	P33333	303 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	SDS24	P38314	527 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	RFC4	P40339	323 aa	Known RBP	4.2	□□□□□ -1.74
SUP35	YDR172W	SPG5	P42933	373 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	ASK10	P48361	1146 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YGL204C	P53089	101 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YIP4	P53093	235 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YGR042W	P53227	271 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	VHT1	P53241	593 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	MPP6	P53725	186 aa	Predicted RBP	4.2	□□□□□ -1.74
SUP35	YDR172W	SNX41	Q04053	625 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	COQ10	Q08058	207 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	ENB1	Q08299	606 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YNG1	Q08465	219 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	RAX1	Q08760	435 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	BAG7	Q12128	409 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	RDI1	Q12434	202 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YOR343C	Q12484	108 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	SET6	Q12529	373 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	NHP6B	P11633	99 aa	Known RBP	4.2	□□□□□ -1.74
SUP35	YDR172W	STE18	P18852	110 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	ITR1	P30605	584 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	PMT2	P31382	759 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	TRS65	P32893	560 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	PDR3	P33200	976 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	MSN4	P33749	630 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	LEU5	P38702	357 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	RRF1	P38771	230 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YER184C	P39961	794 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	SHR5	P41912	237 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	RSM28	Q03430	361 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YMR210W	Q03649	449 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	HEM25	Q07534	307 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	REX3	Q12090	404 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	YGL194C-A	Q2V2P6	80 aa		4.2	□□□□□ -1.74
SUP35	YDR172W	SGA1	P08019	549 aa		4.19	□□□□□ -1.74
SUP35	YDR172W	PPG1	P32838	368 aa		4.19	□□□□□ -1.74
SUP35	YDR172W	RPC34	P32910	317 aa		4.19	□□□□□ -1.74
SUP35	YDR172W	MRPL3	P36516	390 aa		4.19	□□□□□ -1.74
SUP35	YDR172W	VMA7	P39111	118 aa		4.19	□□□□□ -1.74
SUP35	YDR172W	YJL193W	P39542	402 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 83.6 ms