RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C MPD2Q99316 277 aa5.66□□□□□ -1.5
VPS61YDR136C PBN1P25580 416 aa5.65□□□□□ -1.5
VPS61YDR136C PMT2P31382 759 aa5.65□□□□□ -1.5
VPS61YDR136C PRO1P32264 428 aa5.65□□□□□ -1.5
VPS61YDR136C VPS51P36116 164 aa5.65□□□□□ -1.5
VPS61YDR136C FMP46P36141 133 aaKnown RBP5.65□□□□□ -1.5
VPS61YDR136C MRPL27P36526 146 aaPredicted RBP5.65□□□□□ -1.5
VPS61YDR136C EHT1P38295 451 aa5.65□□□□□ -1.5
VPS61YDR136C YPC1P38298 316 aa5.65□□□□□ -1.5
VPS61YDR136C PRP39P39682 629 aaKnown RBP5.65□□□□□ -1.5
VPS61YDR136C YAL037WP39728 267 aa5.65□□□□□ -1.5
VPS61YDR136C LRO1P40345 661 aa5.65□□□□□ -1.5
VPS61YDR136C CCC1P47818 322 aa5.65□□□□□ -1.5
VPS61YDR136C SNN1P48232 102 aa5.65□□□□□ -1.5
VPS61YDR136C COQ5P49017 307 aa5.65□□□□□ -1.5
VPS61YDR136C PHO23P50947 330 aa5.65□□□□□ -1.5
VPS61YDR136C TYW3P53177 273 aa5.65□□□□□ -1.5
VPS61YDR136C INP1Q03694 420 aa5.65□□□□□ -1.5
VPS61YDR136C SNX41Q04053 625 aa5.65□□□□□ -1.5
VPS61YDR136C GUP2Q08929 609 aa5.65□□□□□ -1.5
VPS61YDR136C SRO7Q12038 1033 aa5.65□□□□□ -1.5
VPS61YDR136C ARO3P14843 370 aaKnown RBP5.64□□□□□ -1.51
VPS61YDR136C ERG4P25340 473 aa5.64□□□□□ -1.51
VPS61YDR136C DBF20P32328 564 aa5.64□□□□□ -1.51
VPS61YDR136C MDH3P32419 343 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VPS61YDR136C TRS65P32893 560 aa5.64□□□□□ -1.51
VPS61YDR136C SDH8P38345 138 aa5.64□□□□□ -1.51
VPS61YDR136C RRP3P38712 501 aaKnown RBP5.64□□□□□ -1.51
VPS61YDR136C IKI1P38874 309 aa5.64□□□□□ -1.51
VPS61YDR136C MNL1P38888 796 aa5.64□□□□□ -1.51
VPS61YDR136C SKN7P38889 622 aa5.64□□□□□ -1.51
VPS61YDR136C BFR1P38934 470 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VPS61YDR136C ASP1P38986 381 aaPredicted RBP5.64□□□□□ -1.51
VPS61YDR136C VPS52P39904 641 aa5.64□□□□□ -1.51
VPS61YDR136C YIL060WP40519 144 aa5.64□□□□□ -1.51
VPS61YDR136C ZIM17P42844 174 aa5.64□□□□□ -1.51
VPS61YDR136C YJR111CP47148 283 aaKnown RBP5.64□□□□□ -1.51
VPS61YDR136C RSM27P53305 110 aa5.64□□□□□ -1.51
VPS61YDR136C CWC24P53769 259 aa5.64□□□□□ -1.51
VPS61YDR136C SMX3P54999 86 aaPredicted RBP5.64□□□□□ -1.51
VPS61YDR136C MRPL51Q06090 140 aaPredicted RBP5.64□□□□□ -1.51
VPS61YDR136C NOC4Q06512 552 aaPredicted RBP5.64□□□□□ -1.51
VPS61YDR136C YPR172WQ06608 200 aa5.64□□□□□ -1.51
VPS61YDR136C AVO1Q08236 1176 aa5.64□□□□□ -1.51
VPS61YDR136C RTK1Q12100 620 aaPredicted RBP5.64□□□□□ -1.51
VPS61YDR136C ORT1Q12375 292 aa5.64□□□□□ -1.51
VPS61YDR136C SET6Q12529 373 aa5.64□□□□□ -1.51
VPS61YDR136C TFB5Q3E7C1 72 aaPredicted RBP5.64□□□□□ -1.51
VPS61YDR136C MATALPHA1P0CY06 175 aa5.63□□□□□ -1.51
VPS61YDR136C HMLALPHA1P0CY07 175 aa5.63□□□□□ -1.51
VPS61YDR136C SAC7P17121 654 aa5.63□□□□□ -1.51
VPS61YDR136C NUP1P20676 1076 aa5.63□□□□□ -1.51
VPS61YDR136C CPR4P25334 318 aa5.63□□□□□ -1.51
VPS61YDR136C FMT1P32785 401 aa5.63□□□□□ -1.51
VPS61YDR136C YKL162CP36052 402 aa5.63□□□□□ -1.51
VPS61YDR136C OCA5P38738 679 aa5.63□□□□□ -1.51
VPS61YDR136C PUG1P40100 303 aa5.63□□□□□ -1.51
VPS61YDR136C AVT7P40501 490 aa5.63□□□□□ -1.51
VPS61YDR136C CIN2P46670 268 aa5.63□□□□□ -1.51
VPS61YDR136C MCM22P47167 239 aa5.63□□□□□ -1.51
VPS61YDR136C SRB7P47822 140 aa5.63□□□□□ -1.51
VPS61YDR136C NIF3P53081 288 aa5.63□□□□□ -1.51
VPS61YDR136C OKP1P53298 406 aa5.63□□□□□ -1.51
VPS61YDR136C OGG1P53397 376 aaPredicted RBP5.63□□□□□ -1.51
VPS61YDR136C MPP6P53725 186 aaPredicted RBP5.63□□□□□ -1.51
VPS61YDR136C ERV25P54837 211 aaKnown RBP5.63□□□□□ -1.51
VPS61YDR136C CTF19Q02732 369 aa5.63□□□□□ -1.51
VPS61YDR136C MRPL1Q04599 285 aa5.63□□□□□ -1.51
VPS61YDR136C VBA4Q04602 768 aaKnown RBP5.63□□□□□ -1.51
VPS61YDR136C TDA6Q06466 467 aa5.63□□□□□ -1.51
VPS61YDR136C IRC13Q08630 104 aa5.63□□□□□ -1.51
VPS61YDR136C NPC2Q12408 173 aa5.63□□□□□ -1.51
VPS61YDR136C TFC7Q12415 435 aa5.63□□□□□ -1.51
VPS61YDR136C RRI1Q12468 440 aa5.63□□□□□ -1.51
VPS61YDR136C PCC1Q3E833 88 aa5.63□□□□□ -1.51
VPS61YDR136C Q0142Q9ZZW4 58 aa5.63□□□□□ -1.51
VPS61YDR136C CET1O13297 549 aaPredicted RBP5.62□□□□□ -1.51
VPS61YDR136C RPL20AP0CX23 172 aaKnown RBP5.62□□□□□ -1.51
VPS61YDR136C RPL20BP0CX24 172 aaPredicted RBP5.62□□□□□ -1.51
VPS61YDR136C GAS1P22146 559 aaKnown RBP5.62□□□□□ -1.51
VPS61YDR136C PTP1P25044 335 aa5.62□□□□□ -1.51
VPS61YDR136C TRR1P29509 319 aaKnown RBP5.62□□□□□ -1.51
VPS61YDR136C VAM7P32912 316 aa5.62□□□□□ -1.51
VPS61YDR136C PPZ2P33329 710 aa5.62□□□□□ -1.51
VPS61YDR136C MSN4P33749 630 aa5.62□□□□□ -1.51
VPS61YDR136C PAD1P33751 242 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VPS61YDR136C SPT10P35208 640 aa5.62□□□□□ -1.51
VPS61YDR136C GPX1P36014 167 aa5.62□□□□□ -1.51
VPS61YDR136C PAN3P36102 679 aaPredicted RBP5.62□□□□□ -1.51
VPS61YDR136C LYS1P38998 373 aaRIP-Chip data5.62□□□□□ -1.51not detected
VPS61YDR136C GPI14P47088 403 aaKnown RBP5.62□□□□□ -1.51
VPS61YDR136C SCW4P53334 386 aaKnown RBP5.62□□□□□ -1.51
VPS61YDR136C BUD25P85052 153 aa5.62□□□□□ -1.51
VPS61YDR136C DAL4Q04895 635 aa5.62□□□□□ -1.51
VPS61YDR136C MRX8Q05473 314 aa5.62□□□□□ -1.51
VPS61YDR136C SYM1Q06563 197 aa5.62□□□□□ -1.51
VPS61YDR136C HEM25Q07534 307 aa5.62□□□□□ -1.51
VPS61YDR136C SDO1Q07953 250 aaKnown RBP5.62□□□□□ -1.51
VPS61YDR136C COQ10Q08058 207 aa5.62□□□□□ -1.51
VPS61YDR136C HRT1Q08273 121 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms