RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD28	YDR030C	SSK1	Q07084	712 aa		4.17	□□□□□ -1.74
RAD28	YDR030C	ATG31	Q12421	196 aa		4.17	□□□□□ -1.74
RAD28	YDR030C	FMP16	Q12497	93 aa		4.17	□□□□□ -1.74
RAD28	YDR030C	CCH1	P50077	2039 aa		4.17	□□□□□ -1.74
RAD28	YDR030C	ADK1	P07170	222 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	NHP6B	P11633	99 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	PDA1	P16387	420 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	YPK2	P18961	677 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	RNA14	P25298	677 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	PBN1	P25580	416 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	ATS1	P31386	333 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	SFK1	P35735	353 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	CHK1	P38147	527 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	WSC4	P38739	605 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	RRF1	P38771	230 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	YHR122W	P38829	231 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	FET3	P38993	636 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	SER3	P40054	469 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	RFC4	P40339	323 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	ALK1	P43633	760 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	YJL163C	P46996	555 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	ALB1	P47019	175 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	APS3	P47064	194 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	ECM27	P47144	725 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	UBC11	P52492	156 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	SAY1	P53324	424 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	RSM28	Q03430	361 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	MFB1	Q04922	465 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	CYK3	Q07533	885 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	AIM6	Q07716	390 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	FMP40	Q08968	688 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	DAP1	Q12091	152 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	PSF1	Q12488	208 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	YDR034W-B	Q6Q5X2	51 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	BAR1	P12630	587 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	CDC23	P16522	626 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	YCP4	P25349	247 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	DBF20	P32328	564 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RAD28	YDR030C	PDR3	P33200	976 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	YKL071W	P36086	256 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	APL3	P38065	1025 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	VBA2	P38358	474 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	RRP4	P38792	359 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	CAT5	P41735	233 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	OGG1	P53397	376 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	ERG13	P54839	491 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	DID2	P69771	204 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	SCS7	Q03529	384 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	DCR2	Q05924	578 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	PEX30	Q06169	523 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	NMA1	Q06178	401 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	KEI1	Q06346	221 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	YPR174C	Q06616	221 aa	Predicted RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	FRE3	Q08905	711 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	YDL109C	Q12103	647 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	RTC5	Q12108	567 aa	Known RBP	4.16	□□□□□ -1.74
RAD28	YDR030C	INP53	Q12271	1107 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	RDI1	Q12434	202 aa		4.16	□□□□□ -1.74
RAD28	YDR030C	RPL20A	P0CX23	172 aa	Known RBP	4.15	□□□□□ -1.75
RAD28	YDR030C	RPL20B	P0CX24	172 aa	Predicted RBP	4.15	□□□□□ -1.75
RAD28	YDR030C	NUP1	P20676	1076 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	GPI12	P23797	304 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	FEN2	P25621	512 aa	Known RBP	4.15	□□□□□ -1.75
RAD28	YDR030C	ERG24	P32462	438 aa	Known RBP	4.15	□□□□□ -1.75
RAD28	YDR030C	MTC7	P32633	139 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	GPX1	P36014	167 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	PEX32	P38292	413 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	LEU5	P38702	357 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	HXT9	P40885	567 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	NCE101	Q02820	53 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	YML108W	Q03759	105 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	COX20	Q04935	205 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	LUC7	Q07508	261 aa	Predicted RBP	4.15	□□□□□ -1.75
RAD28	YDR030C	FAB1	P34756	2278 aa		4.15	□□□□□ -1.75
RAD28	YDR030C	DSF1	P0CX08	502 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	YNR073C	P0CX09	502 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	UTR1	P21373	530 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	MXR2	P25566	168 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	CNE1	P27825	502 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	NAM9	P27929	486 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	ACB1	P31787	87 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	TRS65	P32893	560 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	SLC1	P33333	303 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	WBP1	P33767	430 aa	Known RBP	4.14	□□□□□ -1.75
RAD28	YDR030C	RPS27A	P35997	82 aa	Known RBP	4.14	□□□□□ -1.75
RAD28	YDR030C	NAT2	P37293	288 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	MOH1	P38191	138 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	CDS1	P38221	457 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	TCM62	P38228	572 aa	Known RBP	4.14	□□□□□ -1.75
RAD28	YDR030C	RPS27B	P38711	82 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	VPS52	P39904	641 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	PIG2	P40187	538 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	UTP25	P40498	721 aa	Known RBP	4.14	□□□□□ -1.75
RAD28	YDR030C	YIL077C	P40508	320 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	YJR141W	P47172	347 aa	Predicted RBP	4.14	□□□□□ -1.75
RAD28	YDR030C	CCC1	P47818	322 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	YGL204C	P53089	101 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	PEF1	P53238	335 aa		4.14	□□□□□ -1.75
RAD28	YDR030C	VHT1	P53241	593 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms