RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP1	YDR007W	YJL225C	P40889	1758 aa		5.19	□□□□□ -1.58
TRP1	YDR007W	COS2	P0CX12	379 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	COS3	P0CX13	379 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	CBS2	P14905	389 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	RNA14	P25298	677 aa	Known RBP	5.18	□□□□□ -1.58
TRP1	YDR007W	MEI5	P32489	222 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	MCR1	P36060	302 aa	Known RBP	5.18	□□□□□ -1.58
TRP1	YDR007W	YBR241C	P38142	488 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	YBR137W	P38276	179 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	ERV15	P38312	142 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	YHR131C	P38835	850 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	MTC6	P38849	526 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	LSM4	P40070	187 aa	Known RBP	5.18	□□□□□ -1.58
TRP1	YDR007W	YKE4	P40544	346 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	TIR3	P40552	269 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	SER2	P42941	309 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	MOG1	P47123	218 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	RPS12	P48589	143 aa	Known RBP	5.18	□□□□□ -1.58
TRP1	YDR007W	COS10	P52924	374 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	RRN9	P53437	365 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	YNR062C	P53748	327 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
TRP1	YDR007W	YNL010W	P53981	241 aa	Known RBP	5.18	□□□□□ -1.58
TRP1	YDR007W	CUR1	Q06469	252 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	DIB1	Q06819	143 aa	Predicted RBP	5.18	□□□□□ -1.58
TRP1	YDR007W	ASR1	Q06834	288 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	SLM3	Q12093	417 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	MDM32	Q12171	622 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	SPO24	Q3E752	67 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	YOR338W	Q99326	363 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	AI5_BETA	Q9ZZX0	354 aa		5.18	□□□□□ -1.58
TRP1	YDR007W	FLO11	P08640	1367 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	TDH1	P00360	332 aa	Known RBP	5.17	□□□□□ -1.58
TRP1	YDR007W	REP2	P03872	296 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	GAL7	P08431	366 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	UGA1	P17649	471 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	MCK1	P21965	375 aa	Known RBP	5.17	□□□□□ -1.58
TRP1	YDR007W	RNA15	P25299	296 aa	Predicted RBP	5.17	□□□□□ -1.58
TRP1	YDR007W	CSM1	P25651	190 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	CIN8	P27895	1000 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	FUN26	P31381	517 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	MUD1	P32605	298 aa	Known RBP	5.17	□□□□□ -1.58
TRP1	YDR007W	MNS1	P32906	549 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	SRP102	P36057	244 aa	Predicted RBP	5.17	□□□□□ -1.58
TRP1	YDR007W	PEX32	P38292	413 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	MDM31	P38880	579 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	SWM2	P40342	146 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	YFL067W	P43537	175 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	DOC1	P53068	250 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	BIO4	P53630	237 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	WSC2	P53832	503 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	YCL001W-A	P87012	153 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	AIM36	Q03798	255 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	YLR283W	Q05867	314 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	GAS2	Q06135	555 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	YOR283W	Q12040	230 aa	Known RBP	5.17	□□□□□ -1.58
TRP1	YDR007W	TRM10	Q12400	293 aa		5.17	□□□□□ -1.58
TRP1	YDR007W	PAA1	Q12447	191 aa	Known RBP	5.17	□□□□□ -1.58
TRP1	YDR007W	PUT4	P15380	627 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	MRPL44	P19956	98 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	CCA1	P21269	546 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	MGT1	P26188	188 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	SUI1	P32911	108 aa	Known RBP	5.16	□□□□□ -1.58
TRP1	YDR007W	GPX2	P38143	162 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	BMT2	P38278	337 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	YHK8	P38776	514 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	GEP4	P38812	185 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	GIM4	P40005	111 aa	Known RBP	5.16	□□□□□ -1.58
TRP1	YDR007W	YJL213W	P40896	331 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	CCC1	P47818	322 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	NBP1	P52919	319 aa	Predicted RBP	5.16	□□□□□ -1.58
TRP1	YDR007W	ERV14	P53173	138 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	CLD1	P53264	445 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	RSM27	P53305	110 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	YNL095C	P53932	642 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	IRC4	Q03036	179 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	RUB1	Q03919	77 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	CAB5	Q03941	241 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	YET2	Q04210	160 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	DDC1	Q08949	612 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	NSL1	Q12143	216 aa		5.16	□□□□□ -1.58
TRP1	YDR007W	CDC28	P00546	298 aa	Known RBP	5.15	□□□□□ -1.59
TRP1	YDR007W	MET2	P08465	486 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	RPS16A	P0CX51	143 aa	Known RBP	5.15	□□□□□ -1.59
TRP1	YDR007W	RPS16B	P0CX52	143 aa	Known RBP	5.15	□□□□□ -1.59
TRP1	YDR007W	SRB6	P32570	121 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	MRPL15	P36523	253 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	MAL32	P38158	584 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	RTC2	P38279	296 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	ARN2	P38724	620 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	NSG1	P38837	291 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	YHR182W	P38870	785 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	AIM10	P39965	576 aa	Known RBP	5.15	□□□□□ -1.59
TRP1	YDR007W	YIR035C	P40579	254 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	ADO1	P47143	340 aa	Known RBP	5.15	□□□□□ -1.59
TRP1	YDR007W	GTO1	P48239	356 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	SWC4	P53201	476 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	MAL12	P53341	584 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	MRPS16	Q02608	121 aa		5.15	□□□□□ -1.59
TRP1	YDR007W	YMR099C	Q03161	297 aa	Known RBP	5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms