RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB17	YDL146W	YLR152C	P54072	576 aa		4.11	□□□□□ -1.75
LDB17	YDL146W	RHO3	Q00245	231 aa	Known RBP	4.11	□□□□□ -1.75
LDB17	YDL146W	DIG1	Q03063	452 aa	Known RBP	4.11	□□□□□ -1.75
LDB17	YDL146W	YMR010W	Q03687	405 aa		4.11	□□□□□ -1.75
LDB17	YDL146W	PEX30	Q06169	523 aa		4.11	□□□□□ -1.75
LDB17	YDL146W	YNG1	Q08465	219 aa		4.11	□□□□□ -1.75
LDB17	YDL146W	HTZ1	Q12692	134 aa	Known RBP	4.11	□□□□□ -1.75
LDB17	YDL146W	SIR4	P11978	1358 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	SPT3	P06844	337 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	RPL23A	P0CX41	137 aa	Known RBP	4.1	□□□□□ -1.75
LDB17	YDL146W	RPL23B	P0CX42	137 aa	Known RBP	4.1	□□□□□ -1.75
LDB17	YDL146W	ZWF1	P11412	505 aa	Known RBP	4.1	□□□□□ -1.75
LDB17	YDL146W	PPH21	P23594	369 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	PMT2	P31382	759 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	ALK2	P32789	676 aa	Predicted RBP	4.1	□□□□□ -1.75
LDB17	YDL146W	YCR087C-A	P37263	153 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	YBR137W	P38276	179 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
LDB17	YDL146W	KRE29	P40026	464 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	COG3	P40094	801 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	ICE2	P40499	491 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	YJL016W	P47072	561 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	SWS2	P53937	143 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	PRP38	Q00723	242 aa	Predicted RBP	4.1	□□□□□ -1.75
LDB17	YDL146W	RSA1	Q08932	381 aa		4.1	□□□□□ -1.75
LDB17	YDL146W	HEM4	P06174	275 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	PET494	P07390	489 aa	Predicted RBP	4.09	□□□□□ -1.75
LDB17	YDL146W	WSC4	P38739	605 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	GIM4	P40005	111 aa	Known RBP	4.09	□□□□□ -1.75
LDB17	YDL146W	AZF1	P41696	914 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	IKS1	P47042	667 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	OST3	P48439	350 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	BRR6	P53062	197 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	YDC1	Q02896	317 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	YDR415C	Q04033	374 aa	Predicted RBP	4.09	□□□□□ -1.75
LDB17	YDL146W	ECM11	Q04110	302 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	GMC1	Q04399	608 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	MMT2	Q08970	484 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	YLR126C	Q12288	251 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	EAF3	Q12432	401 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	CSR2	Q12734	1121 aa		4.09	□□□□□ -1.75
LDB17	YDL146W	YAL064W-B	O13512	126 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
LDB17	YDL146W	IFM1	P25038	676 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	GIT1	P25346	518 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	YHR127W	P38833	243 aa	Known RBP	4.08	□□□□□ -1.76
LDB17	YDL146W	OST1	P41543	476 aa	Known RBP	4.08	□□□□□ -1.76
LDB17	YDL146W	LCB3	P47013	409 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	NBP35	P52920	328 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	YGL235W	P53071	178 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	YET2	Q04210	160 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	YMR254C	Q04838	102 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	HNT3	Q08702	217 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	YDR018C	Q12185	396 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	YGK3	Q12222	375 aa	Predicted RBP	4.08	□□□□□ -1.76
LDB17	YDL146W	MCT1	Q12283	360 aa		4.08	□□□□□ -1.76
LDB17	YDL146W	FOL3	Q12676	427 aa	Predicted RBP	4.08	□□□□□ -1.76
LDB17	YDL146W	CPT1	P17898	393 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	PHO80	P20052	293 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	SPS18	P32572	300 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	SGE1	P33335	543 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	NUF2	P33895	451 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	MIX23	P38162	196 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	DER1	P38307	211 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	GOS1	P38736	223 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	PET8	P38921	284 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	SER33	P40510	469 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	YIL029C	P40538	142 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	NRK1	P53915	240 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	SUR7	P54003	302 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	TDA1	Q03533	586 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	COQ10	Q08058	207 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	NDD1	Q08887	554 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	FCY22	Q12119	530 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	RFM1	Q12192	310 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	PET20	Q99373	253 aa		4.07	□□□□□ -1.76
LDB17	YDL146W	ASP3-2	P0CX77	362 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	ASP3-3	P0CX78	362 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	ASP3-4	P0CX79	362 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	ASP3-1	P0CZ17	362 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	AEP1	P32493	518 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	MRPL3	P36516	390 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	HMT1	P38074	348 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	MRP21	P38175	177 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	YBP1	P38315	674 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	PEX22	P39718	180 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	MAM33	P40513	266 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	AGE2	P40529	298 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	YJR056C	P47115	236 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	MCM22	P47167	239 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	SBH2	P52871	88 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	YGL039W	P53183	348 aa	Known RBP	4.06	□□□□□ -1.76
LDB17	YDL146W	PDR17	P53844	350 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	SCS7	Q03529	384 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	YML018C	Q03730	393 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	FMP42	Q04991	504 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	YPR091C	Q06833	770 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	YDL114W	Q07530	308 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	TPO4	Q12256	659 aa		4.06	□□□□□ -1.76
LDB17	YDL146W	YDL199C	Q12407	687 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms